Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_02910 and AO356_02915 are separated by 180 nucleotidesAO356_02915 and AO356_02920 are separated by 166 nucleotidesAO356_02920 and AO356_02925 are separated by 26 nucleotidesAO356_02925 and AO356_02930 are separated by 121 nucleotides AO356_02910: AO356_02910 - TetR family transcriptional regulator, at 651,845 to 652,471 _02910 AO356_02915: AO356_02915 - terpene utilization protein AtuA, at 652,652 to 654,442 _02915 AO356_02920: AO356_02920 - acetyl-CoA carboxylase carboxyltransferase subunit, at 654,609 to 656,225 _02920 AO356_02925: AO356_02925 - acyl-CoA dehydrogenase, at 656,252 to 657,409 _02925 AO356_02930: AO356_02930 - 3-methylcrotonyl-CoA carboxylase, at 657,531 to 659,501 _02930
Group Condition AO356_02910 AO356_02915 AO356_02920 AO356_02925 AO356_02930
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.5 -0.3 -0.0 -0.2 -0.2
resistance 20 mM putrescine -0.4 -0.2 -0.1 -0.1 -0.3
carbon source L-Lysine (C) -0.6 -0.1 -0.1 +0.1 -0.4
carbon source D-Fructose (C) -0.5 -0.3 -0.0 -0.1 -0.1
carbon source L-Histidine (C) -0.4 -0.3 -0.0 -0.1 -0.2
stress nitrite 10 mM -0.3 -0.4 +0.0 -0.1 -0.2
nitrogen source Urea (N) -0.2 -0.5 +0.0 -0.1 -0.2
motility outer cut, LB soft agar motility assay +0.7 -0.5 -0.3 +0.1 -0.9
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -0.8 -0.2 +0.1 -0.0 +0.1
carbon source D-Lactate (C) -0.3 +0.2 -0.0 -0.1 -0.5
stress Cisplatin 0.0032 mg/ml -0.2 +0.2 +0.1 -0.1 -0.6
pH Minimal media pH7 -0.2 -0.1 +0.2 +0.1 -0.5
carbon source acetate (C) -0.6 +0.1 +0.2 -0.1 +0.1
carbon source D-Glucosamine Hydrochloride (C) -0.4 -0.5 +0.0 +0.2 +0.3
carbon source D-Gluconic Acid (C) -0.0 -0.2 +0.1 -0.3 +0.3
carbon source acetate (C) -0.5 +0.3 +0.1 +0.2 -0.0
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.1 +0.4 +0.1 +0.1 -0.7
carbon source D-Fructose (C) -0.4 -0.0 +0.2 +0.0 +0.3
motility outer cut, LB soft agar motility assay +0.8 -0.5 -0.0 +0.1 -0.0
carbon source Carbon source Sucrose 10 mM +0.2 -0.3 +0.0 -0.0 +0.4
carbon source D-Trehalose (C) +0.7 -0.1 +0.1 -0.0 -0.3
stress Lomefloxacin 0.0005 mM +0.2 +0.5 -0.0 +0.0 -0.3
stress nitrate 200 mM -0.2 +0.3 +0.0 +0.5 -0.2
motility outer cut, LB soft agar motility assay +0.6 -0.1 +0.1 -0.2 +0.0
stress Sisomicin 0.001 mg/ml +0.4 -0.2 -0.1 +0.2 +0.3
stress Benzalkonium Chloride 0.008 mg/ml +0.2 -0.4 +0.2 +0.1 +0.5
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.2 +0.2 +0.8 +0.2 -0.2
anaerobic Nitrate reduction with yeast extract +0.5 +0.5 -0.2 +0.1 +0.0
stress KB-half, Pseudo5 supernatant -0.3 +0.5 +0.7 -0.1 +0.2
carbon source D-Trehalose (C) +0.8 +0.6 +0.0 +0.2 +0.2
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