Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_02730 and AO356_02735 are separated by 24 nucleotidesAO356_02735 and AO356_02740 overlap by 4 nucleotidesAO356_02740 and AO356_02745 are separated by 4 nucleotidesAO356_02745 and AO356_02750 are separated by 245 nucleotides AO356_02730: AO356_02730 - type III secretion system protein InvA, at 597,166 to 599,217 _02730 AO356_02735: AO356_02735 - type III secretion regulator InvE, at 599,242 to 600,348 _02735 AO356_02740: AO356_02740 - protein InvG, at 600,345 to 602,000 _02740 AO356_02745: AO356_02745 - transcriptional regulator, at 602,005 to 602,742 _02745 AO356_02750: AO356_02750 - nitrate transporter, at 602,988 to 604,199 _02750
Group Condition AO356_02730 AO356_02735 AO356_02740 AO356_02745 AO356_02750
motility outer cut, LB soft agar motility assay +0.2 -2.2 +0.2 -0.5 -0.1
stress Nalidixic 0.004 mg/ml +0.0 -0.6 -0.3 -0.7 -0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.4 -0.6 +0.0 -0.2 -0.4
carbon source Fumarate (C) -0.2 -0.7 -0.2 +0.1 -0.3
carbon source D-Xylose (C) +0.0 -1.1 -0.1 -0.1 +0.1
carbon source D-Trehalose (C) +0.1 -0.9 -0.1 -0.1 -0.1
stress Benzalkonium Chloride 0.016 mg/ml +0.1 -0.7 -0.5 -0.0 -0.0
nitrogen source Uridine (N) -0.2 -0.9 +0.3 +0.0 -0.3
anaerobic Nitrate reduction with yeast extract -0.4 +0.2 -0.5 -0.2 -0.0
stress KB-half, Pseudo5 supernatant -0.0 +0.4 +0.2 -1.1 -0.2
carbon source L-Histidine (C) +0.1 -0.7 -0.1 +0.4 -0.4
stress sodium fluoride 6.25 mM +0.1 -0.8 -0.2 +0.3 -0.0
lb LB +0.0 -0.9 +0.1 +0.4 -0.1
stress Ceftazidime 0.2 mg/ml +0.3 -0.8 +0.1 +0.1 -0.1
carbon source L-Arginine (C) +0.3 -0.7 -0.1 +0.2 -0.1
carbon source L-Arabinose (C) +0.1 -0.8 +0.2 +0.4 -0.1
carbon source D-Ribose (C) -0.1 -0.8 +0.1 +0.4 +0.1
lb LB +0.1 -0.8 +0.2 +0.3 +0.0
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.1 -0.2 +0.5 -0.5 +0.2
stress Lomefloxacin 0.0005 mM -0.3 -0.9 +0.3 +0.8 +0.1
nitrogen source nitrite (N) -0.0 +0.5 +0.1 +0.1 -0.6
stress Benzethonium chloride 0.025 mM +0.2 -0.6 +0.3 +0.6 -0.2
stress perchlorate 75 mM -0.1 +0.3 +0.2 +0.4 -0.4
stress Cholin acetate 40 mM -0.1 -0.3 +0.4 +0.6 -0.0
motility outer cut, LB soft agar motility assay +0.1 +1.0 -0.1 -0.1 +0.2
nitrogen source Urea (N) +0.1 +0.3 -0.1 +0.4 +0.4
stress Tetracycline 0.0001 mg/ml +0.0 +0.8 -0.0 +0.4 +0.1
nitrogen source Inosine (N) +0.0 +0.4 +0.0 +0.2 +0.8
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.1 +0.9 +0.3 +0.2 +0.0
motility outer cut, LB soft agar motility assay +0.1 +0.8 +0.3 +0.0 +0.3
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