Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2C3
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 198 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
AO356_02710 and AO356_02715 overlap by 4 nucleotides
AO356_02715 and AO356_02720 overlap by 4 nucleotides
AO356_02720 and AO356_02725 overlap by 17 nucleotides
AO356_02725 and AO356_02730 are separated by 66 nucleotides
AO356_02710: AO356_02710 - flagellar motor switch/type III secretory pathway protein, at 593,582 to 594,511
_02710
AO356_02715: AO356_02715 - type III secretion effector protein, at 594,508 to 595,377
_02715
AO356_02720: AO356_02720 - type III secretion protein, at 595,374 to 595,829
_02720
AO356_02725: AO356_02725 - ATP synthase, at 595,813 to 597,099
_02725
AO356_02730: AO356_02730 - type III secretion system protein InvA, at 597,166 to 599,217
_02730
Group
Condition
AO356
_02710
AO356
_02715
AO356
_02720
AO356
_02725
AO356
_02730
stress
Sisomicin 0.001 mg/ml
-0.6
+0.4
-2.9
-0.0
-0.1
stress
perchlorate 75 mM
-0.0
-0.2
-1.4
-0.6
-0.1
nitrogen source
Urea (N)
+0.0
-0.4
-1.3
-0.4
+0.1
stress
1-ethyl-3-methylimidazolium chloride 200 mM
+0.2
-0.2
-1.4
-0.2
-0.1
stress
Chlorite 0.04 mM
+0.2
+0.2
-2.0
-0.0
+0.1
stress
acetate 40 mM
-0.1
-0.5
-0.5
-0.1
-0.3
stress
Choline chloride 500 mM
-0.2
-0.4
-0.9
+0.1
+0.1
motility
outer cut, LB soft agar motility assay
+0.1
+0.2
-0.2
-0.9
-0.1
resistance
50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine
-0.0
-0.2
-0.9
+0.3
+0.0
carbon source
D,L-Lactate (C)
-0.1
+0.3
-0.8
-0.1
+0.1
stress
methylglyoxal 0.016 vol%
-0.1
+0.2
-1.3
+0.6
+0.0
motility
outer cut, LB soft agar motility assay
+0.6
-0.0
-0.7
-0.4
+0.1
pH
Minimal media pH8
+0.2
+0.1
-1.1
+0.3
+0.1
phage
P5ss-5 phage 10-1 dilution SM calcl2
+0.1
+0.4
-0.1
-0.8
+0.2
stress
nitrate 200 mM
-0.0
+0.6
-0.6
+0.0
-0.1
motility
outer cut, LB soft agar motility assay
-0.5
-0.5
+1.2
-0.4
+0.1
carbon source
pyruvate (C)
+0.3
+0.3
-0.7
-0.2
+0.3
stress
1-ethyl-3-methylimidazolium lysine 10 mM
-0.1
+0.5
-0.6
+0.3
+0.0
stress
copper (II) chloride 2.5 mM
+0.3
+0.5
+0.6
-1.2
-0.1
carbon source
Carbon source D-Mannitol 10 mM
+0.2
-0.4
-0.3
+0.5
+0.2
nitrogen source
D-Serine (N)
+0.2
+0.4
-0.5
+0.3
+0.1
stress
KB-half, Pseudo5 supernatant
+0.7
-0.6
-0.4
+0.9
-0.0
carbon source
D,L-Lactate (C)
+0.4
+0.6
-0.4
-0.1
+0.1
carbon source
Carbon source D,L-Lactate 10 mM
+0.1
-0.2
+0.6
+0.4
+0.2
pH
Minimal media pH7
-0.2
+0.0
+1.1
+0.1
+0.1
pH
Minimal media pH9
+0.1
+0.4
+0.4
+0.3
+0.2
stress
Thallium(I) acetate 0.008 mg/ml
+0.4
+0.5
+0.5
-0.1
+0.0
carbon source
D-Galactose (C)
+0.4
+0.4
+0.4
+0.1
+0.2
pH
Minimal media pH6
+0.0
+0.1
+0.7
+0.6
+0.2
stress
KB-half, Pseudo11 supernatant, 100 uM FeCl3
+1.0
-0.2
+0.7
+0.8
-0.4
remove
AO356_02710
plot
remove
AO356_02715
plot
remove
AO356_02720
remove
AO356_02725
plot
remove
AO356_02730
plot