Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_02675 and AO356_02680 are separated by 24 nucleotidesAO356_02680 and AO356_02685 are separated by 2 nucleotidesAO356_02685 and AO356_02690 are separated by 271 nucleotidesAO356_02690 and AO356_02695 overlap by 26 nucleotides AO356_02675: AO356_02675 - cell invasion protein, at 587,203 to 588,300 _02675 AO356_02680: AO356_02680 - cell invasion protein SipB, at 588,325 to 590,094 _02680 AO356_02685: AO356_02685 - chaperone protein SicA, at 590,097 to 590,579 _02685 AO356_02690: AO356_02690 - type III secretion system protein SpaS, at 590,851 to 591,885 _02690 AO356_02695: AO356_02695 - type III secretion system protein SpaR, at 591,860 to 592,663 _02695
Group Condition AO356_02675 AO356_02680 AO356_02685 AO356_02690 AO356_02695
anaerobic Nitrate reduction with yeast extract +0.1 +0.0 -0.5 -0.8 -0.5
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.5 -0.1 +0.0 -0.8 -0.0
carbon source Carbon source Sucrose 2.5 mM -0.6 -0.2 -0.2 +0.1 -0.4
stress copper (II) chloride 2.5 mM -0.8 +0.0 +0.0 -0.1 -0.5
stress Cisplatin 0.0032 mg/ml -0.7 -0.1 -0.1 -0.3 -0.1
stress Sisomicin 0.001 mg/ml -1.0 -0.2 -0.2 -0.0 +0.2
carbon source D-Glucose (C) -0.6 -0.1 +0.0 -0.3 -0.2
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.5 -0.1 -0.3 +0.2 -0.3
stress Chlorite 0.08 mM -0.3 +0.3 -0.4 -0.3 -0.2
carbon source Carbon source D,L-Lactate 10 mM +0.2 -0.2 -0.2 -0.2 -0.6
carbon source Carnitine Hydrochloride (C) +0.2 -0.2 -0.1 -0.3 -0.4
stress Cisplatin 0.0032 mg/ml -0.3 +0.2 -0.3 -0.1 -0.2
stress Lomefloxacin 0.0005 mM -0.4 -0.0 +0.1 -0.5 +0.2
survival 4C survival; 1152 hrs +0.6 -0.1 -0.5 -0.2 -0.3
carbon source L-Lysine (C) -0.7 +0.1 +0.2 -0.3 +0.2
stress nitrite 10 mM -0.1 -0.2 +0.1 +0.3 -0.5
stress Tetracycline 0.0001 mg/ml +0.6 -0.1 -0.3 -0.1 -0.4
carbon source D-Gluconic Acid (C) +0.1 +0.2 +0.2 -0.1 -0.5
stress acetate 40 mM +0.3 +0.3 -0.2 -0.3 -0.2
carbon source Carbon source Sucrose 10 mM +0.5 -0.2 -0.1 +0.2 -0.5
resistance 10% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.1 +0.2 +0.2 +0.3 -0.5
nitrogen source Uridine (N) +0.3 +0.2 -0.3 +0.2 -0.3
carbon source L-Histidine (C) +0.6 -0.2 +0.3 -0.5 -0.0
stress Cephalothin 2 mg/ml +0.6 -0.2 +0.1 +0.2 -0.5
motility outer cut, LB soft agar motility assay -0.2 +0.1 -0.1 +0.7 -0.2
carbon source L-Histidine (C) +0.4 -0.2 +0.1 -0.2 +0.4
stress Thallium(I) acetate 0.008 mg/ml +0.1 +0.3 -0.2 +0.4 -0.2
stress KB-half, Pseudo5 supernatant +0.3 +0.6 -0.3 +0.4 -0.4
motility outer cut, LB soft agar motility assay +0.5 +0.6 +0.5 -0.3 -0.7
motility outer cut, LB soft agar motility assay +0.4 +0.1 -0.3 +0.5 -0.1
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