Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_02000 and AO356_02005 overlap by 4 nucleotidesAO356_02005 and AO356_02010 overlap by 4 nucleotidesAO356_02010 and AO356_02015 are separated by 96 nucleotidesAO356_02015 and AO356_02020 overlap by 4 nucleotides AO356_02000: AO356_02000 - peptidoglycan-binding protein, at 441,830 to 442,672 _02000 AO356_02005: AO356_02005 - hypothetical protein, at 442,669 to 442,875 _02005 AO356_02010: AO356_02010 - peptidase, at 442,872 to 443,315 _02010 AO356_02015: AO356_02015 - phage tail protein, at 443,412 to 443,888 _02015 AO356_02020: AO356_02020 - phage tail protein, at 443,885 to 444,349 _02020
Group Condition AO356_02000 AO356_02005 AO356_02010 AO356_02015 AO356_02020
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.4 -2.6 N.D. +0.2 -0.9
anaerobic Nitrate reduction with yeast extract -0.6 -1.5 N.D. +0.2 -0.4
survival 4C survival; 360 hrs -0.2 -0.7 N.D. -0.3 -0.5
motility outer cut, LB soft agar motility assay +0.2 -0.9 N.D. -0.3 -0.8
stress Lomefloxacin 0.0005 mM -0.4 -0.4 N.D. -0.3 -0.6
stress Chlorite 0.08 mM +0.2 -1.1 N.D. +0.0 -0.4
stress Doxycycline hyclate 0.0001 mg/ml -0.1 -0.8 N.D. -0.2 -0.1
stress nitrate 200 mM +0.1 -1.2 N.D. +0.0 -0.1
carbon source Carbon source D-Mannitol 10 mM -0.4 -0.7 N.D. +0.1 +0.3
carbon source Carbon source Sucrose 2.5 mM +0.2 -1.1 N.D. +0.0 +0.2
stress copper (II) chloride 2.5 mM +0.1 -0.9 N.D. -0.1 +0.2
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.1 -0.7 N.D. -0.1 +0.3
carbon source Uridine (C) -0.2 +0.6 N.D. +0.0 -0.4
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.2 -0.6 N.D. +0.1 +0.4
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine +0.2 -0.7 N.D. +0.2 +0.3
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.3 -0.6 N.D. +0.2 +0.2
carbon source acetate (C) -0.2 +1.1 N.D. +0.1 -0.6
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.6 -0.5 N.D. +0.0 +0.1
stress Nickel (II) chloride 0.625 mM -0.1 +0.8 N.D. +0.0 -0.4
carbon source D-Lactate (C) +0.2 +0.6 N.D. -0.0 -0.4
carbon source pyruvate (C) -0.3 +0.7 N.D. +0.2 -0.3
stress Sisomicin 0.001 mg/ml -0.5 +0.1 N.D. -0.2 +0.9
motility outer cut, LB soft agar motility assay +0.1 +0.7 N.D. +0.2 -0.4
carbon source D-Fructose (C) -0.2 +0.8 N.D. +0.3 +0.0
stress methylglyoxal 0.016 vol% +0.1 +0.7 N.D. -0.1 +0.4
carbon source D-Xylose (C) +0.2 +1.1 N.D. +0.0 -0.2
carbon source L-Histidine (C) -0.0 +0.9 N.D. -0.0 +0.3
stress Nickel (II) chloride 0.625 mM -0.2 +1.0 N.D. +0.3 +0.1
carbon source Fumarate (C) +0.4 +0.7 N.D. +0.3 -0.1
stress KB-half, Pseudo5 supernatant +0.9 +0.4 N.D. +0.1 +0.1
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