Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_01830 and AO356_01835 are separated by 260 nucleotidesAO356_01835 and AO356_01840 are separated by 78 nucleotidesAO356_01840 and AO356_01845 are separated by 123 nucleotidesAO356_01845 and AO356_01850 are separated by 102 nucleotides AO356_01830: AO356_01830 - shikimate dehydrogenase, at 408,764 to 409,585 _01830 AO356_01835: AO356_01835 - hypothetical protein, at 409,846 to 410,196 _01835 AO356_01840: AO356_01840 - uracil permease, at 410,275 to 411,792 _01840 AO356_01845: AO356_01845 - N-hydroxyarylamine O-acetyltransferase, at 411,916 to 412,740 _01845 AO356_01850: AO356_01850 - exodeoxyribonuclease III, at 412,843 to 413,637 _01850
Group Condition AO356_01830 AO356_01835 AO356_01840 AO356_01845 AO356_01850
pH Minimal media pH9 -2.7 +0.1 +0.1 -0.0 -0.1
carbon source L-Arabinose (C) -0.1 -0.1 -1.2 -0.3 +0.1
carbon source pyruvate (C) -0.1 -0.0 -1.6 -0.0 +0.2
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.1 -0.1 -0.8 -0.3 -0.2
carbon source D-Fructose (C) +0.0 -0.2 -1.1 -0.3 +0.2
motility outer cut, LB soft agar motility assay -0.1 +0.2 -1.7 +0.1 +0.3
stress Aluminum chloride 5 mM +0.1 +0.0 -1.2 -0.2 -0.0
carbon source L-Proline (C) +0.1 -0.2 -1.1 +0.0 -0.0
stress nitrate 200 mM +0.1 +0.0 -1.4 +0.1 +0.2
carbon source acetate (C) -0.0 +0.1 -1.2 +0.1 +0.2
pH Minimal media pH6 -0.2 +0.0 -0.9 +0.2 -0.0
carbon source Glycerol (C) +0.1 +0.0 -1.1 +0.0 +0.1
survival 4C survival; 192 hrs -0.5 +0.2 -0.8 +0.0 +0.1
carbon source Fumarate (C) -0.2 -0.1 -0.7 -0.1 +0.4
survival 4C survival; 360 hrs -0.4 +0.1 +0.6 -0.1 +0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.1 -0.4 +0.7 +0.2 -0.1
anaerobic Nitrate reduction with yeast extract -0.2 -0.2 +0.4 +0.3 +0.2
carbon source D-Alanine (C) +0.1 -0.3 +0.7 +0.1 -0.1
carbon source Carbon source Sucrose 10 mM -0.2 -0.2 +0.9 +0.1 -0.0
carbon source D-Glucosamine Hydrochloride (C) +1.6 -0.7 +0.2 -0.1 -0.2
nitrogen source L-tyrosine (N) +0.4 -0.1 +0.6 +0.1 -0.1
carbon source Carbon source D-Glucose 10 mM -0.2 +0.0 +1.0 +0.1 +0.0
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.2 -0.0 +0.9 +0.1 -0.1
carbon source Uridine (C) -0.1 +0.0 +1.1 +0.0 +0.1
stress Choline chloride 300 mM +0.1 -0.1 +1.1 -0.1 -0.0
motility outer cut, LB soft agar motility assay +0.1 +0.0 +1.0 -0.3 +0.3
stress Thallium(I) acetate 0.008 mg/ml +0.3 +0.1 +1.1 -0.0 -0.1
stress Lomefloxacin 0.0005 mM -0.1 +0.1 +1.1 +0.2 -0.0
carbon source Carbon source D,L-Lactate 10 mM +0.1 +0.1 +1.1 -0.0 +0.1
carbon source Carbon source D-Mannitol 2.5 mM +0.0 -0.1 +1.3 +0.3 -0.0
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