Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_01730 and AO356_01735 are separated by 47 nucleotidesAO356_01735 and AO356_01740 are separated by 149 nucleotidesAO356_01740 and AO356_01745 are separated by 161 nucleotidesAO356_01745 and AO356_01750 are separated by 107 nucleotides AO356_01730: AO356_01730 - tRNA-Ser, at 391,274 to 391,348 _01730 AO356_01735: AO356_01735 - DNA-binding protein HU, at 391,396 to 391,668 _01735 AO356_01740: AO356_01740 - DNA-binding protein, at 391,818 to 394,214 _01740 AO356_01745: AO356_01745 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 394,376 to 395,659 _01745 AO356_01750: AO356_01750 - ATP-dependent Clp protease proteolytic subunit, at 395,767 to 396,408 _01750
Group Condition AO356_01730 AO356_01735 AO356_01740 AO356_01745 AO356_01750
carbon source L-Histidine (C) N.D. N.D. -3.5 -3.8 -3.9
carbon source L-Histidine (C) N.D. N.D. -2.6 -3.9 -3.8
carbon source Putrescine (C) N.D. N.D. -3.2 -3.2 -3.7
pH Minimal media pH6 N.D. N.D. -2.8 -3.2 -3.4
carbon source L-Lysine (C) N.D. N.D. -2.3 -3.5 -3.4
carbon source Ethanol (C) N.D. N.D. -2.1 -3.7 -3.4
carbon source D-Lactate (C) N.D. N.D. -3.0 -3.1 -3.0
carbon source NAG (C) N.D. N.D. -1.6 -3.7 -3.7
carbon source L-Asparagine (C) N.D. N.D. -1.9 -3.4 -3.6
carbon source L-Leucine (C) N.D. N.D. -1.7 -3.6 -3.5
stress Cholin acetate 40 mM N.D. N.D. -2.8 -3.2 -2.8
carbon source L-Lysine (C) N.D. N.D. -2.4 -3.1 -3.1
stress acetate 40 mM N.D. N.D. -2.9 -3.0 -2.6
nitrogen source Putrescine (N) N.D. N.D. -2.2 -3.2 -3.1
carbon source L-Asparagine (C) N.D. N.D. -1.4 -3.6 -3.5
pH Minimal media pH6 N.D. N.D. -2.7 -2.2 -3.5
stress Cholin acetate 20 mM N.D. N.D. -2.6 -3.2 -2.5
carbon source D-Lactate (C) N.D. N.D. -2.0 -3.2 -3.2
pH Minimal media pH9 N.D. N.D. -1.8 -3.1 -3.4
carbon source L-Arginine (C) N.D. N.D. -0.5 -3.8 -3.8
carbon source D-Alanine (C) N.D. N.D. -1.7 -3.0 -3.3
carbon source m-Inositol (C) N.D. N.D. -1.0 -3.5 -3.6
stress Sisomicin 0.001 mg/ml N.D. N.D. -3.6 -1.9 -2.6
carbon source m-Inositol (C) N.D. N.D. -0.7 -3.6 -3.8
nitrogen source Gly-Glu (N) N.D. N.D. -2.1 -2.8 -3.1
survival 4C survival; 192 hrs N.D. N.D. -3.2 -2.5 -2.3
carbon source L-Arginine (C) N.D. N.D. -0.5 -3.6 -3.8
motility outer cut, LB soft agar motility assay N.D. N.D. -3.4 +2.9 +2.2
motility outer cut, LB soft agar motility assay N.D. N.D. -3.4 +3.3 +2.6
motility outer cut, LB soft agar motility assay N.D. N.D. -2.2 +4.5 +3.7
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