Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_00775 and AO356_00780 are separated by 32 nucleotidesAO356_00780 and AO356_00785 overlap by 4 nucleotidesAO356_00785 and AO356_00790 are separated by 188 nucleotidesAO356_00790 and AO356_00795 overlap by 11 nucleotides AO356_00775: AO356_00775 - glycosyl transferase family 2, at 175,950 to 176,972 _00775 AO356_00780: AO356_00780 - methyltransferase, at 177,005 to 177,751 _00780 AO356_00785: AO356_00785 - polysaccharide synthesis protein GtrA, at 177,748 to 178,155 _00785 AO356_00790: AO356_00790 - epimerase, at 178,344 to 179,441 _00790 AO356_00795: AO356_00795 - 4Fe-4S ferredoxin, at 179,431 to 181,017 _00795
Group Condition AO356_00775 AO356_00780 AO356_00785 AO356_00790 AO356_00795
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.3 -0.9 -0.2 -1.0 -0.4
pH Minimal media pH9 -0.1 -0.5 -0.1 -0.9 -0.1
carbon source L-Lysine (C) -0.1 -0.6 -0.2 -0.5 -0.1
carbon source D-Trehalose (C) -0.2 -0.2 -0.1 -0.4 -0.4
nitrogen source Carnitine Hydrochloride (N) -0.0 -0.3 -0.6 -0.3 -0.2
stress Vanillin 2.5 mM -0.1 -0.1 -0.3 -0.4 -0.4
stress Cobalt chloride 0.08 mM +0.1 -0.6 -0.6 +0.1 +0.2
stress Rifampicin 0.0016 mg/ml +0.0 +0.2 +0.1 -1.0 -0.1
carbon source D-Ribose (C) +0.1 -0.4 +0.1 -0.6 +0.1
carbon source D-Trehalose (C) -0.0 -0.0 -0.5 -0.4 +0.3
stress Sisomicin 0.001 mg/ml -0.3 -0.6 -0.4 +0.1 +0.4
anaerobic Nitrate reduction with yeast extract +0.3 -1.1 -0.3 +0.2 +0.2
stress Lomefloxacin 0.0005 mM +0.0 -0.6 +1.0 -0.7 -0.3
carbon source Fumarate (C) -0.0 -0.1 +0.3 -0.7 +0.1
temperature LB 30C +0.1 -0.6 +0.2 -0.2 +0.1
motility outer cut, LB soft agar motility assay +0.1 -0.2 +0.3 -0.9 +0.5
stress copper (II) chloride 2.5 mM +0.2 +0.1 -0.9 +0.3 +0.2
stress Thallium(I) acetate 0.008 mg/ml -0.2 +0.5 +0.2 -0.7 -0.0
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.0 +0.5 +0.1 -0.3 -0.4
carbon source a-Ketoglutaric (C) -0.1 -0.2 +0.3 -0.4 +0.3
stress nitrite 10 mM +0.1 -0.4 +0.6 +0.0 -0.3
carbon source Carbon source Sucrose 10 mM +0.0 -0.2 +0.4 +0.2 -0.4
carbon source L-Arabinose (C) +0.0 -0.4 +0.4 -0.4 +0.5
motility outer cut, LB soft agar motility assay +0.1 +0.2 -0.4 +0.5 -0.1
carbon source Carbon source Sucrose 5 mM +0.1 +0.1 +0.5 +0.2 -0.4
stress Paraquat dichloride 0.0625 mg/ml -0.2 +0.2 +0.6 +0.4 -0.4
stress Benzalkonium Chloride 0.016 mg/ml +0.1 +0.3 -0.7 +0.6 +0.2
carbon source Carbon source D-Mannitol 2.5 mM +0.2 +0.1 +0.3 +0.5 +0.3
stress KB-half, Pseudo5 supernatant -0.1 +0.4 +0.7 +0.8 -0.3
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.2 +0.4 +0.3 +1.3 -0.6
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