Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_00640 and AO356_00645 are separated by 144 nucleotidesAO356_00645 and AO356_00650 are separated by 54 nucleotidesAO356_00650 and AO356_00655 are separated by 35 nucleotidesAO356_00655 and AO356_00660 are separated by 348 nucleotides AO356_00640: AO356_00640 - TetR family transcriptional regulator, at 137,050 to 137,670 _00640 AO356_00645: AO356_00645 - phenol degradation protein meta, at 137,815 to 138,807 _00645 AO356_00650: AO356_00650 - MFS transporter, at 138,862 to 140,043 _00650 AO356_00655: AO356_00655 - dioxygenase, at 140,079 to 141,527 _00655 AO356_00660: AO356_00660 - 5-carboxymethyl-2-hydroxymuconate isomerase, at 141,876 to 142,727 _00660
Group Condition AO356_00640 AO356_00645 AO356_00650 AO356_00655 AO356_00660
carbon source L-Histidine (C) -0.6 -0.3 -0.2 +0.0 -0.7
carbon source Carbon source D-Mannitol 10 mM -0.1 -0.2 -0.1 -0.1 -1.1
survival 4C survival; 1152 hrs -0.8 -0.0 +0.1 +0.1 -0.7
motility outer cut, LB soft agar motility assay -0.3 +0.1 -0.2 -0.6 -0.3
stress Cholin acetate 40 mM -0.3 -0.2 -0.2 -0.0 -0.6
pH Minimal media pH8 -0.3 -0.1 -0.4 -0.1 -0.2
temperature LB 30C -0.4 +0.1 +0.0 +0.0 -0.8
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.2 -0.5 -0.4 -0.1 +0.2
carbon source D-Xylose (C) +0.1 -0.0 -0.3 -0.2 -0.6
carbon source Carbon source Sucrose 10 mM +0.2 -0.3 +0.1 -0.3 -0.6
carbon source Carbon source Sucrose 2.5 mM -0.1 +0.2 +0.1 -0.1 -0.8
carbon source D-Trehalose (C) -0.6 -0.2 +0.0 -0.2 +0.3
carbon source D-Lactate (C) -0.0 +0.1 +0.3 -0.0 -0.8
pH Minimal media pH9 -0.4 -0.0 +0.2 +0.2 -0.6
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.0 -0.3 +0.2 +0.3 -0.6
carbon source Fumarate (C) +0.2 -0.0 +0.1 +0.1 -0.7
carbon source L-Lysine (C) -0.5 -0.2 +0.2 +0.3 +0.2
nitrogen source L-Isoleucine (N) -0.6 +0.1 +0.3 -0.1 +0.5
stress Chlorite 0.04 mM -0.3 +0.1 +0.7 -0.3 +0.1
carbon source L-Leucine (C) -0.5 +0.1 +0.2 -0.2 +0.8
stress nitrite 10 mM +0.2 +0.1 +0.6 -0.5 +0.2
stress Cobalt chloride 0.08 mM -0.3 -0.1 -0.3 +0.1 +1.1
stress Benzalkonium Chloride 0.016 mg/ml +0.4 -0.3 +0.5 +0.2 -0.2
anaerobic Nitrate reduction with yeast extract -0.3 +0.1 +0.4 +0.2 +0.3
stress Cisplatin 0.0032 mg/ml +0.4 -0.1 -0.3 +0.1 +0.6
stress Nickel (II) chloride 0.625 mM -0.1 +0.1 -0.1 +0.2 +0.8
carbon source Fumarate (C) +0.3 -0.2 +0.3 +0.1 +0.5
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.2 -0.3 +0.7 +0.1 +0.8
stress KB-half, Pseudo5 supernatant -0.2 +0.4 +1.0 +0.5 +0.3
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.1 +0.4 +1.3 +0.4 +0.2
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