Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_00620 and AO356_00625 are separated by 139 nucleotidesAO356_00625 and AO356_00630 are separated by 9 nucleotidesAO356_00630 and AO356_00635 are separated by 83 nucleotidesAO356_00635 and AO356_00640 are separated by 163 nucleotides AO356_00620: AO356_00620 - LysR family transcriptional regulator, at 132,882 to 133,820 _00620 AO356_00625: AO356_00625 - (Fe-S)-binding protein, at 133,960 to 135,216 _00625 AO356_00630: AO356_00630 - ferredoxin, at 135,226 to 136,362 _00630 AO356_00635: AO356_00635 - phenylacetic acid degradation protein, at 136,446 to 136,886 _00635 AO356_00640: AO356_00640 - TetR family transcriptional regulator, at 137,050 to 137,670 _00640
Group Condition AO356_00620 AO356_00625 AO356_00630 AO356_00635 AO356_00640
anaerobic Nitrate reduction with yeast extract +0.0 -1.1 -0.0 -0.6 -0.3
stress Sisomicin 0.001 mg/ml -0.5 -0.4 -0.9 -0.2 +0.2
stress copper (II) chloride 2.5 mM -0.3 -0.3 -0.4 -0.4 -0.2
survival 4C survival; 1152 hrs -0.1 +0.1 -0.3 -0.2 -0.8
stress Cephalothin 2 mg/ml +0.0 -0.1 -0.7 -0.3 -0.2
carbon source Carbon source D,L-Lactate 10 mM -0.2 -0.3 -0.5 +0.2 -0.1
motility outer cut, LB soft agar motility assay +0.2 -0.1 +0.1 -1.1 -0.0
nitrogen source L-Leucine (N) +0.1 -0.3 +0.1 -0.2 -0.6
carbon source D-Trehalose (C) -0.2 +0.2 +0.2 -0.4 -0.6
carbon source Carbon source D-Mannitol 10 mM -0.2 +0.3 -0.8 +0.1 -0.1
carbon source Ethanol (C) -0.1 -0.2 -0.3 -0.4 +0.2
carbon source Carbon source D-Mannitol 2.5 mM -0.1 -0.2 -0.4 +0.3 -0.3
stress Choline chloride 300 mM -0.1 +0.2 -0.3 -0.2 -0.3
stress Choline chloride 500 mM +0.3 -0.0 +0.1 -0.5 -0.3
nitrogen source Inosine (N) -0.1 +0.5 -0.2 -0.2 -0.5
carbon source Carbon source Sucrose 5 mM -0.2 -0.2 -0.3 +0.4 -0.3
motility outer cut, LB soft agar motility assay +0.5 -0.3 -0.4 -0.3 +0.1
carbon source Carbon source Sucrose 10 mM -0.0 +0.2 -0.5 -0.4 +0.2
carbon source Fumarate (C) -0.2 -0.5 +0.1 -0.2 +0.2
motility outer cut, LB soft agar motility assay -0.2 +0.6 -0.2 -0.7 +0.1
nitrogen source D-Glucosamine Hydrochloride (N) -0.2 +0.4 -0.1 +0.1 -0.4
stress Nalidixic 0.004 mg/ml -0.4 +0.2 -0.3 +0.3 +0.1
motility outer cut, LB soft agar motility assay +0.1 -0.0 -0.8 +0.8 -0.3
pH Minimal media pH9 -0.3 -0.2 +0.4 +0.4 -0.4
stress KB-half, Pseudo5 supernatant -0.1 +0.3 -0.3 +0.4 -0.2
nitrogen source Uridine (N) -0.2 +0.5 -0.2 +0.2 -0.2
stress Chlorite 0.04 mM +0.2 +0.5 +0.0 -0.2 -0.3
carbon source L-Glutamine (C) +0.3 +0.2 +0.5 -0.2 -0.1
stress nitrite 10 mM -0.3 +0.2 +0.5 +0.1 +0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.1 +0.3 +0.1 +0.7 +0.1
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