Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_00510 and AO356_00515 are separated by 826 nucleotidesAO356_00515 and AO356_00520 are separated by 11 nucleotidesAO356_00520 and AO356_00525 overlap by 4 nucleotidesAO356_00525 and AO356_00530 are separated by 77 nucleotides AO356_00510: AO356_00510 - cobalamin biosynthesis protein CobW, at 107,903 to 108,967 _00510 AO356_00515: AO356_00515 - cobalt transporter, at 109,794 to 109,982 _00515 AO356_00520: AO356_00520 - cobalt transporter, at 109,994 to 110,689 _00520 AO356_00525: AO356_00525 - cobalamin biosynthesis protein CobE, at 110,686 to 111,090 _00525 AO356_00530: AO356_00530 - precorrin-4 C11-methyltransferase, at 111,168 to 111,914 _00530
Group Condition AO356_00510 AO356_00515 AO356_00520 AO356_00525 AO356_00530
nitrogen source Adenosine (N) N.D. N.D. -1.0 -1.5 -2.5
motility outer cut, LB soft agar motility assay N.D. N.D. -0.9 -1.2 -1.0
carbon source Tween 20 (C) N.D. N.D. -0.8 -1.0 -1.2
carbon source D-Lactate (C) N.D. N.D. -0.3 -1.6 -1.0
pH Minimal media pH8 N.D. N.D. -0.8 -1.3 -0.8
carbon source D-Sorbitol (C) N.D. N.D. -0.1 -1.4 -1.2
anaerobic Nitrate reduction with yeast extract N.D. N.D. -1.3 -0.2 -1.0
nitrogen source nitrite (N) N.D. N.D. -0.6 -1.3 -0.6
nitrogen source Ammonium chloride (N) N.D. N.D. -0.8 -0.7 -1.0
carbon source L-Asparagine (C) N.D. N.D. -1.1 -0.5 -0.7
nitrogen source L-Leucine (N) N.D. N.D. -2.3 +0.1 -0.2
pH Minimal media pH7 N.D. N.D. -0.9 -0.6 -0.8
stress syringaldehyde 5 mM N.D. N.D. -0.6 -0.9 -0.7
carbon source L-Malic (C) N.D. N.D. +0.2 -1.1 -1.2
carbon source m-Inositol (C) N.D. N.D. -0.3 -0.3 -1.5
pH Minimal media pH8 N.D. N.D. -1.2 -0.3 -0.5
nitrogen source D-Alanine (N) N.D. N.D. -0.0 -0.8 -1.1
carbon source L-Proline (C) N.D. N.D. -0.1 -1.0 -0.7
carbon source Tween 20 (C) N.D. N.D. -0.7 -0.3 -0.7
carbon source L-Glutamic (C) N.D. N.D. +0.0 -0.3 -1.4
carbon source L-Malic (C) N.D. N.D. +0.2 -0.7 -1.1
motility outer cut, LB soft agar motility assay N.D. N.D. +0.5 -0.8 -0.7
carbon source Carbon source Sucrose 10 mM N.D. N.D. +0.4 -0.6 -0.8
carbon source casaminos (C) N.D. N.D. -0.8 +0.5 -0.6
carbon source Carbon source D,L-Lactate 10 mM N.D. N.D. +0.2 -1.4 +0.4
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 N.D. N.D. -0.5 +0.6 -0.6
carbon source Carbon source D-Glucose 10 mM N.D. N.D. +0.4 -1.2 +0.4
stress Sisomicin 0.001 mg/ml N.D. N.D. -0.2 +1.0 -0.8
stress Nickel (II) chloride 0.625 mM N.D. N.D. +0.3 -0.8 +0.6
nitrogen source D-Serine (N) N.D. N.D. -0.8 +0.7 +0.4
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