Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_00170 and AO356_00175 overlap by 4 nucleotidesAO356_00175 and AO356_00180 are separated by 9 nucleotidesAO356_00180 and AO356_00185 are separated by 89 nucleotidesAO356_00185 and AO356_00190 are separated by 74 nucleotides AO356_00170: AO356_00170 - lytic transglycosylase, at 30,875 to 31,423 _00170 AO356_00175: AO356_00175 - conjugal transfer protein, at 31,420 to 31,935 _00175 AO356_00180: AO356_00180 - conjugal transfer protein TraG, at 31,945 to 34,050 _00180 AO356_00185: AO356_00185 - hypothetical protein, at 34,140 to 34,871 _00185 AO356_00190: AO356_00190 - hypothetical protein, at 34,946 to 36,082 _00190
Group Condition AO356_00170 AO356_00175 AO356_00180 AO356_00185 AO356_00190
motility outer cut, LB soft agar motility assay -5.7 +0.3 -0.1 +0.1 +0.6
motility outer cut, LB soft agar motility assay -1.9 +0.0 -0.1 -0.0 -0.1
anaerobic Nitrate reduction with yeast extract -3.2 +0.8 -0.0 +0.4 +0.3
stress KB-half, Pseudo5 supernatant -0.4 -0.2 -0.1 -0.6 -0.3
motility outer cut, LB soft agar motility assay -2.0 +0.4 +0.2 +0.0 +0.0
stress Sisomicin 0.001 mg/ml +0.2 -0.9 -0.1 -0.2 -0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.4 +0.2 +0.1 -0.6 -0.2
stress Cholin acetate 40 mM -1.2 +0.3 +0.0 +0.2 +0.1
stress 1-ethyl-3-methylimidazolium acetate 10 mM -1.0 +0.4 +0.0 -0.0 +0.1
motility outer cut, LB soft agar motility assay -1.4 +0.2 +0.3 +0.3 +0.4
carbon source Carbon source Sucrose 5 mM +0.6 +0.1 -0.1 -0.6 -0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.9 -1.3 +0.2 +0.2 +0.2
stress Aluminum chloride 5 mM +0.4 +0.7 +0.0 -0.2 -0.2
carbon source acetate (C) +1.0 +0.3 +0.0 -0.3 -0.0
stress Cisplatin 0.0032 mg/ml +0.7 +0.1 -0.3 +0.7 -0.0
stress Cisplatin 0.0032 mg/ml +1.0 -0.2 +0.0 +0.2 +0.1
carbon source D-Xylose (C) +1.3 -0.1 +0.0 -0.1 +0.0
pH Minimal media pH8 +0.9 -0.2 +0.1 +0.2 +0.1
carbon source D-Fructose (C) +1.0 +0.3 +0.1 -0.2 +0.1
carbon source Fumarate (C) +0.5 +0.5 +0.3 -0.2 +0.2
carbon source D,L-Lactate (C) +1.0 +0.5 -0.1 -0.2 +0.2
carbon source D-Xylose (C) +1.3 +0.2 -0.0 -0.2 +0.0
carbon source D-Ribose (C) +1.1 +0.1 +0.2 -0.0 +0.2
stress Choline chloride 500 mM +0.3 +0.4 +0.2 +0.3 +0.3
carbon source D-Trehalose (C) +1.5 +0.1 -0.1 -0.0 +0.0
carbon source Putrescine (C) +1.2 +0.1 -0.0 +0.2 +0.1
carbon source acetate (C) +1.3 +0.2 +0.1 -0.1 +0.0
carbon source D-Trehalose (C) +1.4 +0.1 +0.1 +0.1 -0.0
carbon source NAG (C) +1.2 +0.5 +0.1 +0.1 -0.1
carbon source L-Isoleucine (C) +1.0 +0.1 +0.2 +0.3 +0.3
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