Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_00100 and AO356_00105 overlap by 4 nucleotidesAO356_00105 and AO356_00110 are separated by 86 nucleotidesAO356_00110 and AO356_00115 are separated by 237 nucleotidesAO356_00115 and AO356_00120 are separated by 152 nucleotides AO356_00100: AO356_00100 - conjugal transfer protein, at 19,719 to 20,474 _00100 AO356_00105: AO356_00105 - integrase, at 20,471 to 20,989 _00105 AO356_00110: AO356_00110 - hypothetical protein, at 21,076 to 21,318 _00110 AO356_00115: AO356_00115 - hypothetical protein, at 21,556 to 22,671 _00115 AO356_00120: AO356_00120 - DNA topoisomerase III, at 22,824 to 24,791 _00120
Group Condition AO356_00100 AO356_00105 AO356_00110 AO356_00115 AO356_00120
anaerobic Nitrate reduction with yeast extract -0.7 -1.0 -0.9 +0.1 -0.4
stress acetate 40 mM -0.7 -0.4 -0.0 +0.0 +0.1
carbon source D-Glucose (C) -0.4 -0.4 +0.1 -0.2 +0.1
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.6 -0.1 -0.2 +0.1 +0.2
stress Lomefloxacin 0.0005 mM +0.1 +0.2 -0.5 -0.2 -0.0
carbon source acetate (C) -0.4 +0.1 +0.4 -0.2 -0.1
resistance 10% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.8 +0.2 +0.0 +0.1 +0.1
carbon source D-Fructose (C) -0.6 +0.1 +0.2 -0.0 +0.0
stress Nickel (II) chloride 0.625 mM -0.6 -0.0 +0.3 +0.0 +0.1
stress Sisomicin 0.001 mg/ml -0.9 +0.0 +0.2 +0.3 +0.2
stress copper (II) chloride 2.5 mM -0.4 -0.2 +0.1 -0.0 +0.4
motility outer cut, LB soft agar motility assay -0.5 -0.0 -0.0 +0.5 -0.0
stress Benzalkonium Chloride 0.008 mg/ml -0.6 +0.0 +0.3 -0.0 +0.3
stress Cisplatin 0.0032 mg/ml -0.4 +0.4 -0.2 -0.1 +0.2
carbon source Carbon source D-Mannitol 2.5 mM -0.4 -0.1 +0.4 -0.0 +0.1
carbon source L-Proline (C) -0.4 +0.2 +0.3 +0.1 +0.1
carbon source L-Histidine (C) -0.4 +0.1 +0.2 +0.1 +0.3
stress nitrate 200 mM +0.3 -0.3 -0.0 +0.2 +0.3
carbon source L-Alanine (C) -0.3 +0.1 +0.4 +0.1 +0.1
stress Spectinomycin 0.025 mg/ml -0.3 +0.4 +0.2 +0.1 +0.2
carbon source Carbon source Sucrose 2.5 mM +0.3 +0.1 +0.4 -0.2 +0.1
carbon source Carbon source Sucrose 10 mM +0.7 -0.2 +0.1 -0.0 +0.1
nitrogen source L-Phenylalanine (N) +0.4 -0.1 +0.2 +0.2 +0.1
motility outer cut, LB soft agar motility assay +0.4 +0.7 +0.1 -0.1 -0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.3 +0.3 -0.2 +0.3 +0.3
stress Tetracycline 0.0001 mg/ml +0.7 +0.1 +0.1 +0.0 +0.2
motility outer cut, LB soft agar motility assay +0.4 +0.3 +0.2 +0.1 +0.2
stress Doxycycline hyclate 0.0001 mg/ml +0.6 +0.2 +0.0 +0.2 +0.2
stress nitrite 10 mM +0.7 +0.2 +0.2 -0.1 +0.2
motility outer cut, LB soft agar motility assay +0.7 +0.4 -0.1 +0.3 +0.2
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