Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_29275 and AO353_29280 are separated by 15 nucleotidesAO353_29280 and AO353_29285 are separated by 37 nucleotidesAO353_29285 and AO353_29290 are separated by 205 nucleotidesAO353_29290 and AO353_29295 are separated by 52 nucleotides AO353_29275: AO353_29275 - hypothetical protein, at 6,360,151 to 6,360,855 _29275 AO353_29280: AO353_29280 - hypothetical protein, at 6,360,871 to 6,361,350 _29280 AO353_29285: AO353_29285 - XRE family transcriptional regulator, at 6,361,388 to 6,361,936 _29285 AO353_29290: AO353_29290 - gamma-glutamylputrescine oxidoreductase, at 6,362,142 to 6,363,425 _29290 AO353_29295: AO353_29295 - aldehyde dehydrogenase, at 6,363,478 to 6,364,968 _29295
Group Condition AO353_29275 AO353_29280 AO353_29285 AO353_29290 AO353_29295
nitrogen source Glycine (N) -0.5 -1.4 -0.3 -0.2 -0.3
stress 1-ethyl-3-methylimidazolium acetate 30 mM +0.1 -1.3 -0.6 +0.0 -0.5
carbon source propionate (C) -0.0 -1.4 -0.3 -0.1 -0.3
carbon source L-Alanine (C) -0.3 -1.7 +0.1 +0.0 -0.0
stress Choline chloride 268.5 mM -0.1 -1.0 -0.4 -0.1 -0.3
carbon source Ethanol (C) +0.2 -2.1 -0.1 +0.1 +0.0
stress Nickel (II) chloride 0.625 mM -0.1 -1.0 -0.6 -0.1 -0.0
stress 1-ethyl-3-methylimidazolium lysine 10.5 mM +0.2 -1.2 -0.4 +0.0 -0.3
carbon source acetate (C) -0.1 -1.8 +0.4 +0.1 -0.1
carbon source L-Aspartic Acid (C) +0.1 -0.9 -0.4 -0.0 -0.4
stress Doxycycline hyclate 0.0006 mg/ml +0.3 -0.4 -0.6 +0.1 -1.1
anaerobic N1B4wt with N2E3m denitrifying replicate C +0.2 -1.3 -0.1 +0.0 -0.4
stress Fusidic 0.125 mg/ml +0.3 -1.2 +0.3 -0.0 -0.4
motility outer cut, LB soft agar motility assay +0.1 +0.8 -1.2 -0.1 -0.5
carbon source acetate (C) -0.7 -1.3 +1.1 +0.0 -0.1
carbon source L-Citrulline -0.0 +0.4 +0.3 -0.5 -0.7
denitrifying Nitrate reduction, replicate C -0.6 +0.7 -0.0 -0.3 -0.2
stress Thallium(I) acetate 0.008 mg/ml -0.4 +0.8 -0.3 -0.2 -0.3
stress Cisplatin 0.006 mg/ml -0.8 +1.2 -0.2 -0.2 -0.4
pH Minimal media pH9 -0.2 -0.8 +0.1 -0.2 +0.6
stress Lomefloxacin 0.001 mM -0.6 +0.6 -0.5 -0.1 +0.2
anaerobic Anaerobic, acetate donor; nitrate and iron +0.3 +0.6 -0.9 -0.1 -0.2
carbon source Putrescine (C) +0.1 +0.3 +0.4 -0.5 -0.5
pH Minimal media pH9 -0.5 -0.6 +0.1 -0.1 +0.8
radiation Ionizing radiation, 126.196 Gy, -0.5 +1.0 +0.2 -0.3 +0.2
carbon source L-Citrulline +0.0 +1.4 -0.1 -0.5 -0.3
motility outer cut, LB soft agar motility assay +0.2 +0.7 -0.2 +0.4 -0.4
carbon source D-Alanine (C) +0.0 +1.0 -0.3 -0.2 +0.3
nitrogen source L-Lysine (N) -0.1 -0.1 +2.1 +0.1 -0.2
nitrogen source L-Lysine (N) -0.1 +0.0 +2.1 +0.0 -0.2
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