Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 216 experiments or choose conditions or try the comparative fitness browser

500 ntAO353_29030 and AO353_29035 are separated by 518 nucleotidesAO353_29035 and AO353_29040 are separated by 44 nucleotidesAO353_29040 and AO353_29045 are separated by 231 nucleotidesAO353_29045 and AO353_29050 are separated by 548 nucleotides AO353_29030: AO353_29030 - GntR family transcriptional regulator, at 6,309,207 to 6,309,917 _29030 AO353_29035: AO353_29035 - MFS transporter, at 6,310,436 to 6,311,788 _29035 AO353_29040: AO353_29040 - glucarate dehydratase, at 6,311,833 to 6,313,182 _29040 AO353_29045: AO353_29045 - glycosyltransferase, at 6,313,414 to 6,314,268 _29045 AO353_29050: AO353_29050 - 2'-5' RNA ligase, at 6,314,817 to 6,315,362 _29050
Group Condition AO353_29030 AO353_29035 AO353_29040 AO353_29045 AO353_29050
motility outer cut, LB soft agar motility assay +0.0 -0.2 -0.7 -0.2 -0.5
anaerobic Anaerobic, acetate donor; nitrate and iron -0.0 -0.2 -0.2 -0.3 -0.6
carbon source D-Glucose -0.2 -0.0 -0.3 -0.2 -0.4
carbon source acetate (C) +0.4 -0.2 -0.4 -0.1 -0.7
pH Minimal media pH9 -0.3 -0.2 +0.1 +0.1 -0.6
stress Cobalt chloride 0.32 mM +0.3 +0.1 -0.7 +0.0 -0.4
stress Sisomicin 0.008 mg/ml -0.2 -0.4 +0.6 +0.1 -0.7
carbon source L-Phenylalanine (C) +0.2 -0.2 -0.2 -0.1 -0.3
nitrogen source Glycine (N) +0.1 +0.1 +0.1 -0.2 -0.6
motility outer cut, LB soft agar motility assay +0.4 +0.0 -0.1 -0.5 -0.3
carbon source Trisodium citrate (C) +0.2 -0.2 -0.3 -0.2 -0.1
carbon source L-Valine (C) -0.3 +0.1 -0.1 +0.2 -0.3
stress Thallium(I) acetate 0.008 mg/ml -0.3 +0.1 -0.1 +0.4 -0.3
stress Cisplatin 0.006 mg/ml -0.0 +0.0 -0.5 +0.5 -0.3
stress methylglyoxal 0.009 vol% +0.2 -0.1 -0.6 +0.1 +0.1
anaerobic N1B4wt with N2E3m denitrifying replicate C +0.2 -0.1 +0.1 +0.2 -0.6
carbon source pyruvate (C) -0.0 +0.2 -0.4 +0.2 -0.2
carbon source Ethanol (C) -0.0 +0.0 +0.1 -0.6 +0.4
carbon source L-Asparagine (C) -0.1 +0.0 +0.1 -0.4 +0.3
stress sodium fluoride 6.25 mM +0.5 +0.1 -0.2 -0.2 -0.2
stress Thallium(I) acetate 0.016 mg/ml -0.1 -0.1 +0.2 +0.4 -0.4
carbon source L-Alanine (C) +0.0 -0.3 -0.2 +0.1 +0.4
carbon source Fumarate (C) +0.1 -0.1 -0.3 -0.0 +0.4
stress Thallium(I) acetate 0.016 mg/ml -0.2 +0.2 +0.0 +0.3 -0.3
stress Cisplatin 0.006 mg/ml +0.0 -0.1 +0.2 +0.4 -0.3
lb LB -0.1 +0.2 +0.2 +0.3 -0.5
stress Thallium(I) acetate 0.008 mg/ml -0.3 +0.1 +0.2 +0.5 -0.2
carbon source L-Citrulline -0.2 +0.2 +0.3 +0.4 -0.3
pH Minimal media pH9 -0.2 -0.1 +0.2 +0.0 +0.5
motility outer cut, LB soft agar motility assay +0.1 +0.0 -0.2 +0.2 +0.5
remove
AO353_29030
plot
remove
AO353_29035
plot
remove
AO353_29040
remove
AO353_29045
plot
remove
AO353_29050
plot