Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_29025 and AO353_29030 are separated by 17 nucleotidesAO353_29030 and AO353_29035 are separated by 518 nucleotidesAO353_29035 and AO353_29040 are separated by 44 nucleotidesAO353_29040 and AO353_29045 are separated by 231 nucleotides AO353_29025: AO353_29025 - LysR family transcriptional regulator, at 6,308,236 to 6,309,189 _29025 AO353_29030: AO353_29030 - GntR family transcriptional regulator, at 6,309,207 to 6,309,917 _29030 AO353_29035: AO353_29035 - MFS transporter, at 6,310,436 to 6,311,788 _29035 AO353_29040: AO353_29040 - glucarate dehydratase, at 6,311,833 to 6,313,182 _29040 AO353_29045: AO353_29045 - glycosyltransferase, at 6,313,414 to 6,314,268 _29045
Group Condition AO353_29025 AO353_29030 AO353_29035 AO353_29040 AO353_29045
motility outer cut, LB soft agar motility assay -1.0 +0.0 -0.2 -0.7 -0.2
anaerobic Anaerobic, acetate donor; nitrate and iron -0.2 -0.0 -0.2 -0.2 -0.3
stress Lomefloxacin 0.001 mM -0.7 -0.2 -0.0 +0.1 -0.2
stress Rifampicin 0.005 mg/ml -0.4 -0.5 -0.0 +0.1 -0.1
carbon source L-Asparagine (C) -0.4 -0.1 +0.0 +0.1 -0.4
stress Vancomycin 1 mg/ml -0.5 +0.1 -0.1 -0.1 -0.2
stress copper (II) chloride 2.5 mM -0.2 +0.2 -0.1 -0.4 -0.2
stress Cobalt chloride 0.32 mM -0.4 +0.3 +0.1 -0.7 +0.0
carbon source L-Ornithine -0.5 +0.0 +0.0 +0.3 -0.4
carbon source L-Leucine (C) -0.6 -0.0 +0.2 +0.2 -0.2
stress Cisplatin 0.006 mg/ml -0.5 -0.0 +0.0 -0.5 +0.5
carbon source L-Valine (C) -0.3 -0.3 +0.1 -0.1 +0.2
survival 4C survival; 360 hrs +0.4 -0.3 +0.0 -0.3 -0.2
denitrifying Nitrate reduction, replicate B -0.6 -0.0 +0.0 -0.1 +0.4
stress methylglyoxal 0.009 vol% +0.0 +0.2 -0.1 -0.6 +0.1
stress Doxycycline hyclate 0.0006 mg/ml +0.4 -0.0 -0.2 -0.0 -0.3
stress Cobalt chloride 0.32 mM -0.3 +0.5 -0.1 -0.2 -0.1
carbon source Trisodium citrate (C) +0.3 +0.2 -0.2 -0.3 -0.2
stress sodium fluoride 6.25 mM -0.3 +0.5 +0.1 -0.2 -0.2
stress Furfuryl Alcohol 0.0625 vol% +0.5 -0.0 -0.2 -0.1 -0.2
carbon source acetate (C) +0.3 +0.4 -0.2 -0.4 -0.1
stress 1-ethyl-3-methylimidazolium chloride 170 mM +0.5 -0.3 -0.1 -0.2 +0.1
carbon source L-Phenylalanine (C) +0.5 +0.2 -0.2 -0.2 -0.1
carbon source pyruvate (C) +0.3 -0.0 +0.2 -0.4 +0.2
motility outer cut, LB soft agar motility assay +0.5 +0.4 +0.0 -0.1 -0.5
carbon source L-Citrulline -0.3 -0.2 +0.2 +0.3 +0.4
pH Minimal media pH9 +0.5 -0.2 -0.1 +0.2 +0.0
stress Thallium(I) acetate 0.008 mg/ml -0.1 -0.3 +0.1 +0.2 +0.5
stress Sisomicin 0.008 mg/ml +0.6 -0.2 -0.4 +0.6 +0.1
stress syringaldehyde 5 mM +0.5 +0.2 +0.1 -0.1 +0.1
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