Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_29005 and AO353_29010 are separated by 262 nucleotidesAO353_29010 and AO353_29015 are separated by 308 nucleotidesAO353_29015 and AO353_29020 are separated by 81 nucleotidesAO353_29020 and AO353_29025 are separated by 141 nucleotides AO353_29005: AO353_29005 - hypothetical protein, at 6,304,864 to 6,305,205 _29005 AO353_29010: AO353_29010 - hypothetical protein, at 6,305,468 to 6,305,746 _29010 AO353_29015: AO353_29015 - ABC transporter substrate-binding protein, at 6,306,055 to 6,306,843 _29015 AO353_29020: AO353_29020 - amidohydrolase, at 6,306,925 to 6,308,094 _29020 AO353_29025: AO353_29025 - LysR family transcriptional regulator, at 6,308,236 to 6,309,189 _29025
Group Condition AO353_29005 AO353_29010 AO353_29015 AO353_29020 AO353_29025
stress Doxycycline hyclate 0.0006 mg/ml -2.7 +0.3 +0.2 -0.6 +0.4
motility outer cut, LB soft agar motility assay -0.8 +0.2 -1.2 +0.5 -1.0
carbon source L-Citrulline -0.8 +0.3 -0.6 -0.1 -0.3
anaerobic N1B4wt with N2E3m denitrifying replicate C -0.2 -0.5 +0.2 -0.8 -0.3
stress 1-ethyl-3-methylimidazolium acetate 15 mM -0.9 +0.3 -0.4 -0.6 +0.0
stress Nickel (II) chloride 0.625 mM -1.3 -0.0 -0.3 -0.1 +0.4
pH Minimal media pH9 -1.0 -0.0 -0.4 -0.3 +0.5
temperature LB 30C -1.1 -0.5 +0.3 +0.2 -0.1
carbon source L-Ornithine -0.3 +0.3 -0.5 -0.4 -0.4
stress Spectinomycin 0.2 mg/ml -1.3 +0.4 -0.2 -0.1 +0.2
stress Cobalt chloride 0.16 mM -1.4 +0.1 +0.1 +0.4 -0.3
motility outer cut, LB soft agar motility assay -0.3 -0.3 -1.2 +0.3 +0.4
carbon source propionate (C) -1.4 +0.3 +0.4 -0.1 -0.3
motility outer cut, LB soft agar motility assay -0.8 -0.2 -0.5 +0.6 +0.5
denitrifying Nitrate reduction, replicate B +0.8 -0.5 -0.2 -0.1 -0.6
stress Lomefloxacin 0.001 mM -0.2 -0.2 +0.3 +0.6 -0.7
carbon source L-Phenylalanine (C) +0.1 -0.4 +0.3 -0.6 +0.5
carbon source D-Glucose -0.4 +0.4 -0.4 +0.6 -0.1
stress Sisomicin 0.008 mg/ml +0.6 +0.4 -0.9 -0.5 +0.6
stress Benzethonium chloride 0.025 mM -0.5 -0.2 +0.2 +0.3 +0.7
carbon source L-Ornithine +0.6 +0.2 -0.2 +0.5 -0.5
carbon source L-Citrulline +1.1 +0.3 -0.9 +0.1 -0.0
stress Furfuryl Alcohol 0.0625 vol% +0.7 -0.4 +0.2 +0.3 +0.5
stress Cisplatin 0.006 mg/ml +1.1 +0.6 +0.6 -0.2 -0.5
stress Thallium(I) acetate 0.008 mg/ml +1.2 +0.6 +0.3 -0.4 -0.1
lb LB +1.1 +0.4 -0.2 +0.3 +0.1
carbon source acetate (C) +0.8 -0.2 +0.8 +0.5 +0.3
stress Thallium(I) acetate 0.016 mg/ml +1.5 +0.5 +0.4 +0.1 -0.1
stress Thallium(I) acetate 0.008 mg/ml +1.6 +0.5 -0.1 +0.3 +0.1
stress Cisplatin 0.006 mg/ml +2.7 +0.9 -0.0 -0.1 -0.1
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