Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_28850 and AO353_28855 are separated by 98 nucleotidesAO353_28855 and AO353_28860 are separated by 770 nucleotidesAO353_28860 and AO353_28865 are separated by 25 nucleotidesAO353_28865 and AO353_28870 are separated by 172 nucleotides AO353_28850: AO353_28850 - LysR family transcriptional regulator, at 6,276,824 to 6,277,765 _28850 AO353_28855: AO353_28855 - MFS transporter, at 6,277,864 to 6,279,072 _28855 AO353_28860: AO353_28860 - hypothetical protein, at 6,279,843 to 6,280,169 _28860 AO353_28865: AO353_28865 - hypothetical protein, at 6,280,195 to 6,280,374 _28865 AO353_28870: AO353_28870 - hypothetical protein, at 6,280,547 to 6,280,735 _28870
Group Condition AO353_28850 AO353_28855 AO353_28860 AO353_28865 AO353_28870
anaerobic Anaerobic, acetate donor; nitrate and iron -1.3 +0.0 +0.2 N.D. -0.6
stress Cisplatin 0.006 mg/ml +0.1 -0.1 -0.7 N.D. -0.6
stress Thallium(I) acetate 0.008 mg/ml -0.1 +0.0 -0.9 N.D. -0.2
stress Sisomicin 0.008 mg/ml +0.0 +0.2 -1.1 N.D. -0.2
carbon source L-Ornithine +0.3 +0.1 -0.7 N.D. -0.7
nitrogen source Glycine (N) -0.2 -0.1 -0.5 N.D. -0.3
pH Minimal media pH7 +0.0 -0.0 -0.8 N.D. -0.2
carbon source propionate (C) +0.1 -0.2 -0.8 N.D. -0.1
stress Doxycycline hyclate 0.0006 mg/ml -0.6 +0.0 -0.3 N.D. +0.0
carbon source pyruvate (C) -0.3 -0.1 -0.8 N.D. +0.3
carbon source acetate (C) +0.5 +0.1 -1.2 N.D. +0.1
carbon source D-Trehalose (C) -0.2 +0.0 -0.8 N.D. +0.4
nitrogen source Gly-Glu (N) +0.2 +0.1 -0.8 N.D. -0.0
carbon source L-Alanine (C) +0.3 +0.0 -0.7 N.D. -0.2
stress methylglyoxal 0.009 vol% -0.7 -0.0 -0.2 N.D. +0.4
carbon source L-Malic (C) -0.3 -0.0 -0.4 N.D. +0.3
nitrogen source Parabanic Acid (N) +0.3 -0.0 -0.8 N.D. +0.1
denitrifying Nitrate reduction, replicate B -0.1 -0.0 -0.5 N.D. +0.3
carbon source L-Glutamine (C) +0.1 -0.0 -0.7 N.D. +0.3
motility outer cut, LB soft agar motility assay -0.2 +0.1 -0.7 N.D. +0.5
pH Minimal media pH9 -0.0 +0.1 -0.6 N.D. +0.4
carbon source L-Citrulline +0.2 +0.0 +0.3 N.D. -0.7
motility outer cut, LB soft agar motility assay -0.1 +0.3 -0.6 N.D. +0.5
carbon source L-Ornithine +0.3 -0.2 +0.4 N.D. -0.2
motility outer cut, LB soft agar motility assay -0.2 +0.3 +0.8 N.D. -0.5
stress 1-ethyl-3-methylimidazolium chloride 170 mM +0.2 -0.0 +0.7 N.D. -0.1
stress Cholin acetate 10 mM +0.1 +0.1 +0.9 N.D. -0.3
stress 1-ethyl-3-methylimidazolium acetate 30 mM +0.0 +0.0 +0.9 N.D. -0.1
nitrogen source L-tyrosine (N) +0.2 -0.1 +0.2 N.D. +0.5
carbon source L-Ornithine +0.4 -0.0 +0.6 N.D. +0.2
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