Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_28610 and AO353_28615 are separated by 78 nucleotidesAO353_28615 and AO353_28620 are separated by 192 nucleotidesAO353_28620 and AO353_28625 are separated by 203 nucleotidesAO353_28625 and AO353_28630 are separated by 10 nucleotides AO353_28610: AO353_28610 - lysine transporter LysE, at 6,232,146 to 6,232,766 _28610 AO353_28615: AO353_28615 - MFS transporter, at 6,232,845 to 6,234,371 _28615 AO353_28620: AO353_28620 - LysR family transcriptional regulator, at 6,234,564 to 6,235,424 _28620 AO353_28625: AO353_28625 - hypothetical protein, at 6,235,628 to 6,236,284 _28625 AO353_28630: AO353_28630 - hypothetical protein, at 6,236,295 to 6,237,515 _28630
Group Condition AO353_28610 AO353_28615 AO353_28620 AO353_28625 AO353_28630
motility outer cut, LB soft agar motility assay -0.8 +0.0 -0.1 -0.5 -0.1
stress Nalidixic 0.004 mg/ml -0.2 -0.2 -0.4 -0.3 +0.1
stress copper (II) chloride 2.5 mM -0.5 +0.1 -0.0 -0.2 -0.3
carbon source D-Glucose -0.6 +0.1 -0.3 +0.0 -0.0
stress Ceftazidime 0.12 mg/ml +0.1 -0.1 -0.1 -0.7 +0.1
pH Minimal media pH8 -0.3 -0.2 +0.1 -0.4 +0.2
carbon source D-Serine (C) -0.5 -0.1 +0.3 -0.1 -0.2
nitrogen source L-Citrulline (N) -0.3 -0.2 -0.1 +0.3 -0.3
carbon source L-Leucine (C) -0.5 -0.3 +0.4 -0.0 -0.1
carbon source L-Valine (C) -0.5 -0.1 +0.3 +0.1 -0.3
stress Cisplatin 0.006 mg/ml -0.3 -0.1 +0.4 -0.2 -0.2
motility outer cut, LB soft agar motility assay -0.3 -0.1 -0.8 +0.8 +0.1
carbon source L-Alanine (C) -0.4 -0.0 +0.4 -0.3 +0.0
stress Cisplatin 0.006 mg/ml -0.1 -0.3 -0.3 +0.2 +0.4
stress sodium fluoride 6.25 mM -0.1 +0.0 +0.5 -0.5 +0.0
stress Doxycycline hyclate 0.0006 mg/ml -0.2 -0.5 +0.1 +0.3 +0.3
stress Thallium(I) acetate 0.016 mg/ml -0.3 -0.3 +0.1 +0.2 +0.3
carbon source D-Glucose +0.3 +0.2 -0.4 -0.0 -0.0
nitrogen source L-tyrosine (N) -0.2 -0.3 +0.5 +0.2 -0.1
stress Benzalkonium Chloride 0.012 mg/ml +0.2 +0.3 -0.5 +0.1 -0.0
survival 4C survival; 360 hrs +0.2 +0.1 -0.4 +0.0 +0.3
carbon source L-Citrulline -0.4 -0.1 +0.5 -0.0 +0.3
radiation Ionizing radiation, 126.196 Gy, +0.2 +0.1 +0.3 -0.2 -0.2
nitrogen source Parabanic Acid (N) +0.0 -0.4 +0.3 +0.1 +0.3
stress Chloramphenicol 0.004 mg/ml -0.3 -0.1 +0.2 +0.2 +0.5
carbon source L-Ornithine -0.1 +0.3 -0.2 +0.2 +0.3
carbon source L-Citrulline -0.1 -0.0 +0.3 +0.5 -0.2
carbon source L-Tryptophan (C) +0.5 -0.0 +0.3 -0.2 +0.1
motility outer cut, LB soft agar motility assay +0.1 +0.2 +0.2 +0.5 -0.0
anaerobic Anaerobic, acetate donor; nitrate and iron +0.3 +0.1 +0.1 +0.8 -0.2
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