Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_28580 and AO353_28585 are separated by 72 nucleotidesAO353_28585 and AO353_28590 are separated by 100 nucleotidesAO353_28590 and AO353_28595 are separated by 304 nucleotidesAO353_28595 and AO353_28600 are separated by 76 nucleotides AO353_28580: AO353_28580 - histidine kinase, at 6,225,274 to 6,226,662 _28580 AO353_28585: AO353_28585 - LysR family transcriptional regulator, at 6,226,735 to 6,227,634 _28585 AO353_28590: AO353_28590 - oxidoreductase, at 6,227,735 to 6,228,484 _28590 AO353_28595: AO353_28595 - ABC transporter permease, at 6,228,789 to 6,230,000 _28595 AO353_28600: AO353_28600 - hypothetical protein, at 6,230,077 to 6,230,871 _28600
Group Condition AO353_28580 AO353_28585 AO353_28590 AO353_28595 AO353_28600
stress Furfuryl Alcohol 0.25 vol% -0.0 -0.3 -0.4 -0.2 +0.0
stress 1-ethyl-3-methylimidazolium acetate 15 mM +0.1 -0.3 -0.3 -0.2 -0.0
stress Cisplatin 0.006 mg/ml -0.4 +0.1 -0.1 -0.1 -0.2
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.1 -0.2 -0.2 -0.1 -0.1
carbon source L-Isoleucine (C) +0.2 -0.1 -0.4 -0.1 -0.2
motility outer cut, LB soft agar motility assay +0.2 -0.0 -0.7 -0.1 -0.0
carbon source L-Leucine (C) -0.3 -0.4 +0.1 +0.0 +0.0
stress Cholin acetate 19 mM +0.2 -0.3 -0.2 -0.2 +0.0
carbon source D-Serine (C) +0.1 -0.1 -0.5 +0.1 -0.1
stress methylglyoxal 0.009 vol% +0.2 -0.2 +0.0 -0.3 -0.2
carbon source L-Phenylalanine (C) -0.1 -0.1 +0.2 -0.2 -0.2
stress Cisplatin 0.006 mg/ml -0.3 +0.2 +0.2 -0.1 -0.4
carbon source L-Citrulline +0.2 +0.0 -0.3 -0.1 -0.1
motility outer cut, LB soft agar motility assay +0.3 -0.2 -0.3 +0.1 -0.2
stress Thallium(I) acetate 0.016 mg/ml -0.2 -0.1 +0.4 -0.0 -0.0
survival 4C survival; 192 hrs -0.2 +0.3 -0.2 -0.1 +0.1
stress Doxycycline hyclate 0.0006 mg/ml +0.2 +0.5 -0.4 -0.0 -0.3
stress Chlorite 0.16 mM +0.1 -0.4 +0.2 +0.1 -0.0
lb LB -0.1 +0.3 +0.3 -0.1 -0.2
carbon source L-Ornithine -0.0 -0.4 +0.8 -0.1 -0.0
carbon source L-Citrulline +0.2 -0.1 +0.3 -0.1 -0.1
carbon source L-Ornithine -0.2 +0.3 +0.4 +0.0 -0.1
motility outer cut, LB soft agar motility assay +0.0 +0.2 +0.4 +0.2 -0.3
carbon source L-Ornithine +0.1 -0.1 +0.6 -0.2 +0.1
carbon source acetate (C) +0.1 +0.2 +0.6 -0.2 +0.1
pH Minimal media pH9 +0.1 +0.0 +0.6 -0.0 +0.1
carbon source L-Citrulline +0.0 +0.2 +0.4 +0.2 +0.2
denitrifying Nitrate reduction, replicate C +0.3 +0.4 +0.2 +0.2 +0.1
survival 4C survival; 672 hrs +0.1 +0.7 +0.5 +0.0 +0.1
anaerobic Anaerobic, acetate donor; nitrate and iron +0.2 +0.6 +0.9 +0.0 +0.2
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