Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_27960 and AO353_27965 are separated by 54 nucleotidesAO353_27965 and AO353_27970 are separated by 336 nucleotidesAO353_27970 and AO353_27975 are separated by 93 nucleotidesAO353_27975 and AO353_27980 are separated by 17 nucleotides AO353_27960: AO353_27960 - SAM-dependent methyltransferase, at 6,098,972 to 6,100,018 _27960 AO353_27965: AO353_27965 - hypothetical protein, at 6,100,073 to 6,100,858 _27965 AO353_27970: AO353_27970 - ABC transporter substrate-binding protein, at 6,101,195 to 6,101,971 _27970 AO353_27975: AO353_27975 - ABC transporter, at 6,102,065 to 6,102,754 _27975 AO353_27980: AO353_27980 - amino acid ABC transporter permease, at 6,102,772 to 6,103,467 _27980
Group Condition AO353_27960 AO353_27965 AO353_27970 AO353_27975 AO353_27980
carbon source acetate (C) -0.1 -1.0 -0.6 +0.1 -0.6
motility outer cut, LB soft agar motility assay -0.7 -0.0 -0.8 -0.3 -0.2
carbon source L-Leucine (C) -0.6 -0.0 -0.5 -0.3 -0.3
nitrogen source L-Glutamine (N) -0.3 -0.2 -0.5 -0.2 -0.2
carbon source L-Citrulline -1.0 -0.3 -0.1 -0.2 +0.3
nitrogen source L-Threonine (N) -0.3 -0.2 -0.1 -0.5 -0.1
carbon source L-Alanine (C) -0.2 +0.1 -0.6 -0.8 +0.3
motility outer cut, LB soft agar motility assay +0.2 -0.0 -1.3 +0.2 -0.2
stress Doxycycline hyclate 0.0006 mg/ml -0.3 -0.3 -0.6 +0.0 +0.1
carbon source L-Valine (C) -0.2 +0.0 -0.7 -0.3 +0.1
carbon source D-Glucose +0.7 -0.2 -0.7 -0.6 -0.0
carbon source L-Citrulline -0.0 +0.3 -0.3 -0.3 -0.3
carbon source L-Ornithine -0.5 +0.4 -0.5 -0.1 -0.0
carbon source L-Phenylalanine (C) -0.2 -0.0 +0.3 -0.9 +0.1
carbon source Ethanol (C) +0.0 +0.0 +0.2 -0.5 -0.3
motility outer cut, LB soft agar motility assay +0.4 -0.0 -0.4 -0.4 -0.2
carbon source L-Arginine (C) +0.2 -0.0 +0.2 -0.6 -0.2
carbon source L-Serine (C) +0.2 +0.2 +0.1 -0.3 -0.4
nitrogen source NAG (N) -0.2 +0.0 +0.3 -0.5 +0.2
stress Cisplatin 0.006 mg/ml +0.2 +0.2 +0.1 -0.8 +0.1
pH Minimal media pH9 +0.4 +0.1 -0.7 +0.3 -0.1
stress Thallium(I) acetate 0.016 mg/ml +0.4 +0.4 +0.2 -0.5 -0.2
pH Minimal media pH9 -0.2 -0.2 +0.1 +0.7 -0.0
stress Paraquat dichloride 0.032 mg/mL +0.5 +0.9 -0.5 -0.6 -0.1
stress Thallium(I) acetate 0.008 mg/ml +0.1 +0.5 -0.4 +0.0 +0.2
carbon source L-Ornithine +0.1 +0.8 +0.3 -0.1 -0.6
denitrifying Nitrate reduction, replicate C +0.7 +0.1 -0.2 +0.4 -0.3
stress Benzethonium chloride 0.025 mM -0.1 +0.2 +0.4 +0.4 +0.1
carbon source L-Ornithine -0.0 +0.8 +0.3 +0.1 +0.0
anaerobic Anaerobic, acetate donor; nitrate and iron +0.6 +0.3 +0.7 +0.0 +0.3
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