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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AO353_27860 and AO353_27865 overlap by 4 nucleotides
AO353_27865 and AO353_27870 are separated by 65 nucleotides
AO353_27870 and AO353_27875 are separated by 175 nucleotides
AO353_27875 and AO353_27880 are separated by 111 nucleotides
AO353_27860: AO353_27860 - hypothetical protein, at 6,075,617 to 6,079,288
_27860
AO353_27865: AO353_27865 - hypothetical protein, at 6,079,285 to 6,081,012
_27865
AO353_27870: AO353_27870 - GNAT family acetyltransferase, at 6,081,078 to 6,081,728
_27870
AO353_27875: AO353_27875 - exonuclease III, at 6,081,904 to 6,082,716
_27875
AO353_27880: AO353_27880 - hypothetical protein, at 6,082,828 to 6,084,165
_27880
Group
Condition
AO353
_27860
AO353
_27865
AO353
_27870
AO353
_27875
AO353
_27880
stress
Benzalkonium Chloride 0.01 mg/ml
-1.9
-1.9
-0.1
-0.2
-0.2
stress
Benzalkonium Chloride 0.012 mg/ml
-2.1
-1.8
-0.0
+0.1
-0.1
pH
Minimal media pH9
-1.7
-0.8
-0.0
+0.2
+0.1
stress
1-ethyl-3-methylimidazolium chloride 170 mM
-0.8
-1.1
-0.1
-0.0
-0.0
stress
Polymyxin B sulfate 4 mg/ml
-0.8
-0.8
-0.1
-0.2
-0.2
anaerobic
Anaerobic, acetate donor; nitrate and iron
-0.4
-0.5
-0.1
-1.1
+0.6
stress
Rifampicin 0.005 mg/ml
-0.7
-0.7
-0.1
+0.1
+0.0
stress
Doxycycline hyclate 0.0006 mg/ml
-0.3
-0.6
+0.5
-0.3
-0.5
pH
Minimal media pH9
-0.7
-0.3
+0.2
-0.1
-0.1
carbon source
L-Leucine (C)
-0.5
-0.5
+0.1
+0.6
-0.4
carbon source
acetate (C)
-0.5
-0.2
-0.3
+0.2
+0.3
stress
methylglyoxal 0.008 vol%
+0.1
+0.2
+0.3
-0.9
-0.2
carbon source
D,L-Lactate (C)
-0.3
-0.4
+0.1
+0.5
-0.0
carbon source
acetate (C)
-0.6
-0.2
-0.0
+0.4
+0.2
stress
Cisplatin 0.006 mg/ml
+0.8
+0.5
-0.0
-0.7
-0.5
stress
Cisplatin 0.006 mg/ml
+0.5
+0.6
-0.2
-0.6
+0.2
carbon source
L-Phenylalanine (C)
-0.4
+0.0
+0.1
+0.4
+0.4
carbon source
L-Ornithine
+0.6
+0.2
+0.4
-0.2
-0.3
carbon source
D-Glucose
+0.6
+0.5
+0.3
-0.3
-0.1
carbon source
L-Citrulline
+0.4
+0.4
+0.4
-0.0
+0.2
carbon source
L-Ornithine
+0.7
+0.3
+0.7
-0.2
-0.1
stress
Nickel (II) chloride 0.625 mM
+0.6
+0.2
+0.2
+0.3
+0.1
stress
Tetracycline 0.0016 mg/ml
+0.7
+0.4
+0.4
+0.0
-0.1
carbon source
L-Citrulline
+0.4
+0.4
+0.4
+0.2
+0.0
carbon source
L-Citrulline
+0.6
+0.2
+0.5
+0.1
+0.0
stress
Cobalt chloride 0.16 mM
+0.2
+0.2
+0.1
+0.7
+0.2
stress
nitrate 200 mM
+0.8
+0.8
+0.3
-0.2
-0.1
stress
Nickel (II) chloride 0.625 mM
+0.7
+0.6
+0.0
+0.1
+0.2
carbon source
L-Ornithine
+0.5
+0.6
+0.5
-0.1
+0.1
stress
perchlorate 75 mM
+1.3
+1.3
+0.4
-0.2
+0.1
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AO353_27870
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