Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_27355 and AO353_27360 are separated by 2 nucleotidesAO353_27360 and AO353_27365 are separated by 2 nucleotidesAO353_27365 and AO353_27370 are separated by 10 nucleotidesAO353_27370 and AO353_27375 are separated by 43 nucleotides AO353_27355: AO353_27355 - hypothetical protein, at 5,976,275 to 5,977,507 _27355 AO353_27360: AO353_27360 - portal protein, at 5,977,510 to 5,979,120 _27360 AO353_27365: AO353_27365 - hypothetical protein, at 5,979,123 to 5,979,338 _27365 AO353_27370: AO353_27370 - terminase, at 5,979,349 to 5,981,238 _27370 AO353_27375: AO353_27375 - DNA packaging protein, at 5,981,282 to 5,981,806 _27375
Group Condition AO353_27355 AO353_27360 AO353_27365 AO353_27370 AO353_27375
carbon source L-Citrulline -0.3 +0.2 -1.1 -0.3 -0.8
stress Cobalt chloride 0.32 mM -0.2 -0.1 -1.2 +0.1 -0.2
anaerobic Anaerobic, acetate donor; nitrate and iron +0.6 -0.0 -1.0 -0.0 -1.0
stress Tetracycline 0.0016 mg/ml -0.1 +0.1 +0.1 -0.0 -1.3
stress Lomefloxacin 0.001 mM -0.2 -0.4 -0.1 +0.2 -0.7
stress Cisplatin 0.006 mg/ml +0.6 -0.6 -0.1 -0.0 -1.1
motility outer cut, LB soft agar motility assay +0.2 -0.3 -0.3 -0.2 -0.6
stress Sisomicin 0.008 mg/ml -0.1 -0.1 +0.2 -0.2 -0.8
stress copper (II) chloride 2.5 mM +0.3 -0.0 -0.9 +0.1 -0.6
carbon source L-Ornithine -0.3 +0.4 -0.5 -0.3 -0.2
carbon source pyruvate (C) -0.2 +0.1 -0.5 +0.2 -0.6
carbon source Uridine (C) +0.4 -0.1 -0.4 -0.2 -0.6
nitrogen source Ammonium chloride (N) +0.4 -0.0 -1.0 +0.1 -0.1
carbon source L-Citrulline +0.9 -0.4 -0.8 +0.1 -0.4
stress Cobalt chloride 0.32 mM +0.2 +0.1 -0.5 +0.1 -0.5
carbon source L-Alanine (C) +0.4 +0.2 -0.5 -0.2 -0.5
nitrogen source Thymine (N) +0.3 +0.3 -0.5 +0.0 -0.5
carbon source L-Phenylalanine (C) +0.2 -0.2 +0.4 -0.0 -0.7
carbon source L-Tryptophan (C) +0.5 -0.4 -0.4 -0.0 +0.1
stress methylglyoxal 0.008 vol% +0.1 -0.3 +0.4 +0.2 -0.6
carbon source L-Citrulline +0.3 +0.1 -0.6 -0.2 +0.1
stress Paraquat dichloride 0.032 mg/mL +0.1 +0.2 +0.4 +0.2 -0.8
carbon source propionate (C) -0.3 +0.2 +0.4 +0.2 -0.3
denitrifying Nitrate reduction, replicate B -0.2 -0.0 +0.8 -0.3 +0.1
stress Doxycycline hyclate 0.0006 mg/ml +0.1 -0.7 +1.2 +0.1 -0.2
stress Cisplatin 0.006 mg/ml +0.1 -0.3 +1.1 +0.1 -0.4
lb LB +0.4 -0.0 +0.4 +0.3 -0.3
denitrifying Nitrate reduction, replicate C -0.5 +0.2 +0.4 +0.1 +0.6
stress methylglyoxal 0.009 vol% -0.0 -0.3 +1.1 +0.1 +0.1
carbon source acetate (C) +0.1 +0.8 +0.8 +0.2 +0.3
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