Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_26620 and AO353_26625 are separated by 103 nucleotidesAO353_26625 and AO353_26630 are separated by 195 nucleotidesAO353_26630 and AO353_26635 are separated by 187 nucleotidesAO353_26635 and AO353_26640 are separated by 1 nucleotides AO353_26620: AO353_26620 - ArsR family transcriptional regulator, at 5,829,363 to 5,829,698 _26620 AO353_26625: AO353_26625 - MBL fold metallo-hydrolase, at 5,829,802 to 5,830,665 _26625 AO353_26630: AO353_26630 - ArsR family transcriptional regulator, at 5,830,861 to 5,831,349 _26630 AO353_26635: AO353_26635 - branched-chain alpha-ketoacid dehydrogenase, E1 component alpha subunit (EC 1.2.4.4) (from data), at 5,831,537 to 5,832,772 _26635 AO353_26640: AO353_26640 - 2-oxoisovalerate dehydrogenase, at 5,832,774 to 5,833,832 _26640
Group Condition AO353_26620 AO353_26625 AO353_26630 AO353_26635 AO353_26640
carbon source L-Valine (C) +0.6 +0.0 -3.4 -3.9 -3.9
carbon source L-Isoleucine (C) +0.5 -0.1 -3.1 -3.1 -3.9
carbon source L-Leucine (C) +0.3 +0.1 -3.2 -3.1 -3.5
stress Sisomicin 0.008 mg/ml -3.6 -0.8 +0.0 +0.1 -0.1
carbon source acetate (C) -0.9 -0.0 -0.3 -0.9 -1.6
motility outer cut, LB soft agar motility assay +0.2 -0.1 -0.7 -0.6 -1.1
carbon source propionate (C) +0.0 +0.0 -0.7 -0.8 -0.9
stress methylglyoxal 0.009 vol% -0.8 -0.4 +0.2 -0.5 -0.6
stress Cisplatin 0.006 mg/ml +0.3 +0.4 -1.5 -0.2 -1.1
carbon source L-Serine (C) -1.0 +0.1 -0.5 -0.4 -0.1
stress Cobalt chloride 0.32 mM -0.2 +0.2 -0.5 -0.5 -0.6
pH Minimal media pH9 -0.5 -0.5 -0.3 -0.3 +0.4
survival 4C survival; 672 hrs +0.7 +0.0 -0.5 -0.7 -0.5
carbon source D-Trehalose (C) -1.2 +0.1 +0.2 -0.3 +0.5
nitrogen source Parabanic Acid (N) +0.3 -0.4 +0.2 +0.1 -0.9
stress Cisplatin 0.006 mg/ml +0.6 +0.4 -0.7 -0.1 -0.8
carbon source L-Aspartic Acid (C) -0.4 +0.7 +0.1 -0.3 -0.4
motility outer cut, LB soft agar motility assay +0.5 +0.9 -0.6 -0.4 -0.4
stress Lomefloxacin 0.001 mM -0.4 +0.4 +0.5 +0.5 +0.5
carbon source L-Citrulline -0.5 +0.1 +0.5 +0.7 +0.7
anaerobic Anaerobic, acetate donor; nitrate and iron +0.4 -0.2 -0.1 +0.6 +0.9
carbon source L-Ornithine -0.4 -0.5 +0.7 +1.1 +0.7
carbon source L-Ornithine -0.2 +0.0 +0.3 +0.7 +1.0
carbon source L-Citrulline -0.4 -0.1 +0.3 +0.7 +1.3
carbon source D-Glucose -0.2 +0.5 +0.5 +0.7 +0.6
carbon source L-Ornithine +0.1 -0.6 +0.7 +1.1 +0.9
carbon source L-Ornithine +0.2 -0.3 +0.7 +0.5 +1.0
carbon source D-Glucose -0.1 -0.2 +0.7 +1.0 +0.8
carbon source L-Citrulline -0.2 -0.4 +1.2 +0.9 +0.9
carbon source L-Citrulline -0.9 +0.5 +0.7 +1.3 +0.8
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