Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_26565 and AO353_26570 are separated by 622 nucleotidesAO353_26570 and AO353_26575 are separated by 230 nucleotidesAO353_26575 and AO353_26580 are separated by 0 nucleotidesAO353_26580 and AO353_26585 are separated by 122 nucleotides AO353_26565: AO353_26565 - nitrate reductase, at 5,815,802 to 5,817,289 _26565 AO353_26570: AO353_26570 - Dihydropyrimidinase (EC 3.5.2.2) (from data), at 5,817,912 to 5,819,351 _26570 AO353_26575: AO353_26575 - dihydropyrimidine dehydrogenase, at 5,819,582 to 5,820,949 _26575 AO353_26580: AO353_26580 - Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2) (from data), at 5,820,950 to 5,822,224 _26580 AO353_26585: AO353_26585 - TetR family transcriptional regulator, at 5,822,347 to 5,822,967 _26585
Group Condition AO353_26565 AO353_26570 AO353_26575 AO353_26580 AO353_26585
nitrogen source Uridine (N) -3.7 -3.7 -3.5 -5.0 -0.1
nitrogen source Thymine (N) -3.1 -4.6 +0.2 -0.1 -0.1
motility outer cut, LB soft agar motility assay -0.5 +0.2 -0.3 -0.1 -0.5
anaerobic Anaerobic, acetate donor; nitrate and iron -0.2 -1.2 -0.2 +0.2 +0.2
carbon source L-Ornithine +0.4 -0.2 -0.8 -0.6 +0.2
nitrogen source Parabanic Acid (N) -0.1 -0.6 -0.3 +0.2 -0.3
carbon source L-Citrulline +0.4 -0.1 -0.0 -0.6 -0.4
nitrogen source NAG (N) +0.1 +0.1 -0.0 -0.3 -0.7
motility outer cut, LB soft agar motility assay +0.8 +0.4 -0.1 -0.6 -1.0
carbon source L-Asparagine (C) -0.1 -0.4 -0.4 +0.2 +0.3
stress Cholin acetate 38 mM -0.2 +0.4 -0.5 -0.2 +0.2
carbon source L-Citrulline +0.3 +0.6 -0.5 -0.4 -0.0
denitrifying Nitrate reduction, replicate B +0.3 -0.1 -0.3 -0.3 +0.3
carbon source L-Valine (C) -0.2 +0.2 +0.5 -0.4 -0.0
carbon source L-Citrulline -0.4 +0.7 -0.1 +0.2 -0.4
carbon source Putrescine (C) +0.5 -0.5 +0.2 -0.1 -0.0
stress acetate 34 mM +0.2 +0.3 -0.3 -0.2 +0.1
stress Thallium(I) acetate 0.016 mg/ml -0.4 +0.2 +0.6 -0.0 -0.1
carbon source D-Glucose +0.3 +0.3 +0.2 -0.5 -0.0
stress Spectinomycin 0.2 mg/ml +0.4 +0.3 -0.6 -0.1 +0.4
stress Thallium(I) acetate 0.016 mg/ml -0.2 +0.4 +0.4 -0.3 -0.1
carbon source propionate (C) +0.3 +0.2 -0.4 +0.3 -0.0
carbon source L-Leucine (C) +0.6 -0.2 +0.3 -0.0 -0.1
carbon source D-Glucose +0.6 +0.3 +0.2 -0.4 -0.1
carbon source L-Tryptophan (C) +0.0 +0.9 -0.0 -0.1 -0.1
stress Furfuryl Alcohol 0.125 vol% -0.1 +0.2 +0.5 +0.2 -0.2
stress Sisomicin 0.008 mg/ml +0.3 -0.2 +0.4 +0.2 +0.1
stress Rifampicin 0.005 mg/ml +0.6 -0.1 -0.0 +0.2 +0.4
stress Spectinomycin 0.15 mg/ml +0.1 +0.4 +0.4 +0.1 +0.2
stress Lomefloxacin 0.001 mM +0.7 +0.4 +0.4 +0.3 -0.0
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