Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_25280 and AO353_25285 are separated by 151 nucleotidesAO353_25285 and AO353_25290 overlap by 4 nucleotidesAO353_25290 and AO353_25295 are separated by 3 nucleotidesAO353_25295 and AO353_25300 are separated by 789 nucleotides AO353_25280: AO353_25280 - gamma-glutamyltransferase, at 5,576,496 to 5,578,106 _25280 AO353_25285: AO353_25285 - transglutaminase, at 5,578,258 to 5,579,055 _25285 AO353_25290: AO353_25290 - hypothetical protein, at 5,579,052 to 5,580,002 _25290 AO353_25295: AO353_25295 - hypothetical protein, at 5,580,006 to 5,581,415 _25295 AO353_25300: AO353_25300 - LysR family transcriptional regulator, at 5,582,205 to 5,583,119 _25300
Group Condition AO353_25280 AO353_25285 AO353_25290 AO353_25295 AO353_25300
carbon source L-Histidine (C) -0.2 -0.4 +0.0 -0.1 -0.7
stress Cisplatin 0.006 mg/ml -0.2 +0.4 -0.2 -0.2 -0.9
stress Lomefloxacin 0.001 mM +0.2 -1.0 +0.1 -0.3 -0.1
motility outer cut, LB soft agar motility assay +0.2 -0.6 -1.0 +0.2 +0.3
anaerobic Anaerobic, acetate donor; nitrate and iron -0.7 +0.7 -0.5 -0.3 +0.2
lb LB +0.2 -0.3 +0.2 -0.1 -0.4
stress Cisplatin 0.006 mg/ml +0.1 +0.5 -0.1 +0.1 -0.9
carbon source L-Glutamic (C) -0.3 -0.3 -0.0 -0.1 +0.5
stress acetate 17 mM +0.2 -0.5 +0.4 -0.3 -0.1
stress Vanillin 1.25 mM +0.4 +0.2 -0.1 -0.1 -0.6
survival 4C survival; 192 hrs -0.1 -0.4 +0.3 -0.1 +0.4
carbon source L-Citrulline +0.3 -0.5 -0.7 +0.3 +0.8
stress Paraquat dichloride 0.032 mg/mL -0.6 +0.3 +0.1 +0.1 +0.2
denitrifying Nitrate reduction, replicate B -0.7 +0.1 +0.4 -0.2 +0.6
stress 1-ethyl-3-methylimidazolium lysine 10.5 mM +0.4 -0.3 +0.4 -0.0 -0.2
stress syringaldehyde 5 mM +0.4 -0.3 +0.3 -0.0 -0.2
stress acetate 34 mM +0.5 -0.3 +0.4 -0.0 -0.0
carbon source L-Ornithine -0.2 -0.3 +0.3 +0.1 +0.6
carbon source propionate (C) -0.6 +0.5 +0.2 -0.3 +0.5
carbon source L-Serine (C) -0.3 -0.2 +0.1 +0.1 +0.9
carbon source L-Glutamine (C) -0.3 +0.5 +0.4 +0.1 -0.0
carbon source L-Ornithine -0.1 +0.2 +0.2 -0.2 +0.6
nitrogen source Adenosine (N) -0.3 +0.3 +0.2 +0.0 +0.8
carbon source L-Citrulline +0.2 -0.4 +0.5 -0.1 +0.8
pH Minimal media pH9 +0.2 +0.4 +0.5 -0.2 +0.2
stress Sisomicin 0.008 mg/ml -0.1 +0.2 +0.4 +0.2 +0.4
carbon source L-Ornithine -0.0 +0.4 -0.0 +0.2 +0.7
survival 4C survival; 672 hrs +0.3 -0.0 +0.5 -0.0 +0.6
denitrifying Nitrate reduction, replicate C +0.1 +0.3 +0.6 +0.0 +0.6
carbon source acetate (C) +0.3 +0.4 +0.4 +0.0 +1.1
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