Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_25275 and AO353_25280 are separated by 69 nucleotidesAO353_25280 and AO353_25285 are separated by 151 nucleotidesAO353_25285 and AO353_25290 overlap by 4 nucleotidesAO353_25290 and AO353_25295 are separated by 3 nucleotides AO353_25275: AO353_25275 - hypothetical protein, at 5,575,767 to 5,576,426 _25275 AO353_25280: AO353_25280 - gamma-glutamyltransferase, at 5,576,496 to 5,578,106 _25280 AO353_25285: AO353_25285 - transglutaminase, at 5,578,258 to 5,579,055 _25285 AO353_25290: AO353_25290 - hypothetical protein, at 5,579,052 to 5,580,002 _25290 AO353_25295: AO353_25295 - hypothetical protein, at 5,580,006 to 5,581,415 _25295
Group Condition AO353_25275 AO353_25280 AO353_25285 AO353_25290 AO353_25295
motility outer cut, LB soft agar motility assay -0.5 +0.2 -0.6 -1.0 +0.2
stress Lomefloxacin 0.001 mM -0.5 +0.2 -1.0 +0.1 -0.3
carbon source L-Citrulline -0.9 +0.0 -0.3 -0.1 +0.0
carbon source L-Citrulline -0.4 +0.3 -0.5 -0.7 +0.3
carbon source D-Fructose (C) -0.6 -0.2 -0.2 +0.2 -0.2
stress sodium fluoride 6.25 mM -0.4 -0.5 -0.1 +0.1 -0.1
stress copper (II) chloride 2.5 mM -0.7 -0.1 -0.1 +0.1 -0.2
carbon source L-Leucine (C) -0.6 -0.1 -0.5 +0.1 +0.1
nitrogen source L-Phenylalanine (N) -0.5 -0.2 -0.2 +0.3 -0.1
carbon source D-Glucose -0.6 +0.1 +0.0 -0.3 +0.2
anaerobic Anaerobic, acetate donor; nitrate and iron +0.4 -0.7 +0.7 -0.5 -0.3
carbon source L-Malic (C) +0.4 -0.2 -0.3 -0.2 -0.2
stress Cobalt chloride 0.32 mM -0.2 -0.6 +0.2 +0.1 +0.1
denitrifying Nitrate reduction, replicate B +0.1 -0.7 +0.1 +0.4 -0.2
stress acetate 17 mM -0.1 +0.2 -0.5 +0.4 -0.3
carbon source succinate (C) -0.2 -0.3 +0.3 +0.2 -0.2
carbon source propionate (C) -0.0 -0.6 +0.5 +0.2 -0.3
stress Doxycycline hyclate 0.0002 mg/ml -0.3 +0.0 +0.5 -0.3 +0.1
stress Cisplatin 0.006 mg/ml +0.3 -0.2 +0.4 -0.2 -0.2
carbon source L-Ornithine +0.3 -0.2 -0.3 +0.3 +0.1
carbon source Ethanol (C) +0.4 -0.2 +0.3 -0.3 -0.0
carbon source L-Citrulline +0.2 +0.2 -0.4 +0.5 -0.1
stress acetate 34 mM -0.1 +0.5 -0.3 +0.4 -0.0
pH Minimal media pH9 -0.3 +0.2 +0.4 +0.5 -0.2
stress 1-ethyl-3-methylimidazolium lysine 10.5 mM +0.2 +0.4 -0.3 +0.4 -0.0
stress Doxycycline hyclate 0.0006 mg/ml +0.3 +0.2 +0.5 -0.0 -0.3
stress syringaldehyde 5 mM +0.3 +0.4 -0.3 +0.3 -0.0
carbon source L-Glutamine (C) +0.3 -0.3 +0.5 +0.4 +0.1
carbon source acetate (C) +0.4 +0.3 +0.4 +0.4 +0.0
denitrifying Nitrate reduction, replicate C +0.5 +0.1 +0.3 +0.6 +0.0
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