Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_25205 and AO353_25210 are separated by 44 nucleotidesAO353_25210 and AO353_25215 are separated by 30 nucleotidesAO353_25215 and AO353_25220 are separated by 79 nucleotidesAO353_25220 and AO353_25225 are separated by 57 nucleotides AO353_25205: AO353_25205 - permease DsdX, at 5,561,016 to 5,562,359 _25205 AO353_25210: AO353_25210 - D-serine ammonia-lyase (EC 4.3.1.18) (from data), at 5,562,404 to 5,563,756 _25210 AO353_25215: AO353_25215 - transcriptional regulator, at 5,563,787 to 5,564,722 _25215 AO353_25220: AO353_25220 - hypothetical protein, at 5,564,802 to 5,565,071 _25220 AO353_25225: AO353_25225 - hypothetical protein, at 5,565,129 to 5,565,398 _25225
Group Condition AO353_25205 AO353_25210 AO353_25215 AO353_25220 AO353_25225
carbon source D-Serine (C) -2.7 -3.7 -4.0 -0.2 -0.1
nitrogen source D-Serine (N) -0.3 -1.9 -1.2 -0.2 -0.2
carbon source L-Serine (C) -0.4 -0.6 -0.6 +0.3 -0.1
carbon source L-Citrulline -0.1 -0.6 +0.4 -0.4 -0.6
stress acetate 68 mM -0.4 -0.1 -0.1 -0.7 -0.1
nitrogen source nitrite (N) -0.1 -0.0 -0.1 -0.9 -0.2
nitrogen source L-Glutamine (N) -0.1 +0.1 +0.1 -1.0 -0.4
carbon source L-Alanine (C) -0.2 +0.2 +0.1 -1.1 -0.2
carbon source acetate (C) -0.0 -0.3 +0.1 -1.1 +0.3
stress Doxycycline hyclate 0.0006 mg/ml -0.1 +0.1 +0.1 -0.8 -0.2
stress copper (II) chloride 2.5 mM -0.1 +0.2 +0.2 -0.8 -0.1
stress Ceftazidime 0.12 mg/ml -0.2 -0.2 +0.3 -0.7 +0.2
stress Lomefloxacin 0.001 mM -0.1 +0.1 -0.9 +0.5 -0.1
stress Nalidixic 0.004 mg/ml -0.3 +0.2 +0.2 -0.4 -0.2
motility outer cut, LB soft agar motility assay -0.3 -0.1 +0.4 -0.5 +0.4
motility outer cut, LB soft agar motility assay -0.3 +0.3 -0.5 +0.3 +0.0
stress methylglyoxal 0.009 vol% -0.2 +0.3 +0.3 -0.4 +0.1
motility outer cut, LB soft agar motility assay +0.2 +0.1 -0.4 -0.4 +0.5
carbon source L-Aspartic Acid (C) -0.0 +0.0 +0.2 +0.6 -0.5
anaerobic Anaerobic, acetate donor; nitrate and iron +0.1 +0.2 -0.8 +0.6 +0.4
stress Chlorite 0.16 mM -0.1 +0.1 -0.4 +0.7 +0.2
stress Benzethonium chloride 0.025 mM +0.0 +0.1 -0.4 +0.7 +0.3
stress Furfuryl Alcohol 0.25 vol% -0.3 +0.0 +0.3 +0.5 +0.2
carbon source L-Ornithine +0.1 +0.0 +0.2 +0.8 -0.3
stress Polymyxin B sulfate 4 mg/ml -0.1 -0.2 +0.1 +0.8 +0.2
stress Rifampicin 0.005 mg/ml +0.1 -0.2 +0.3 +0.4 +0.4
carbon source L-Citrulline +0.1 +0.0 +0.4 +0.7 -0.1
carbon source Tween 20 (C) -0.1 +0.3 +0.4 +0.7 +0.0
stress perchlorate 75 mM +0.2 +0.2 +0.3 +0.4 +0.3
carbon source L-Glutamine (C) +0.1 +0.1 +0.2 +1.0 +0.1
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