Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_25160 and AO353_25165 overlap by 23 nucleotidesAO353_25165 and AO353_25170 are separated by 343 nucleotidesAO353_25170 and AO353_25175 are separated by 177 nucleotidesAO353_25175 and AO353_25180 are separated by 119 nucleotides AO353_25160: AO353_25160 - ABC transporter substrate-binding protein, at 5,550,322 to 5,551,299 _25160 AO353_25165: AO353_25165 - ATP-NAD kinase, at 5,551,277 to 5,552,377 _25165 AO353_25170: AO353_25170 - Fis family transcriptional regulator, at 5,552,721 to 5,554,613 _25170 AO353_25175: AO353_25175 - AsnC family transcriptional regulator, at 5,554,791 to 5,555,291 _25175 AO353_25180: AO353_25180 - acetylpolyamine aminohydrolase, at 5,555,411 to 5,556,445 _25180
Group Condition AO353_25160 AO353_25165 AO353_25170 AO353_25175 AO353_25180
carbon source L-Ornithine -0.4 -0.2 -0.2 -2.0 -0.1
carbon source L-Ornithine +0.0 -0.5 -0.1 -1.3 -0.2
stress syringaldehyde 5 mM -1.1 -0.2 -0.2 -0.2 -0.1
stress Thallium(I) acetate 0.016 mg/ml -0.5 -0.3 -0.2 -0.4 -0.2
pH Minimal media pH9 +0.3 -1.0 +0.0 -0.6 -0.1
stress A22 0.01 mg/ml -0.8 -0.3 +0.0 -0.3 +0.1
carbon source L-Isoleucine (C) +0.1 -1.3 +0.2 +0.1 -0.4
carbon source L-Proline (C) -0.3 -0.7 -0.1 -0.4 +0.3
stress Cisplatin 0.006 mg/ml +0.2 -0.7 -0.4 +0.0 -0.2
carbon source L-Alanine (C) -0.2 -0.3 -0.1 +0.3 -0.8
carbon source acetate (C) -0.1 -0.5 +0.1 -0.8 +0.2
carbon source L-Ornithine +0.4 +0.4 -0.2 -1.3 -0.4
pH Minimal media pH9 -0.4 +0.3 -0.5 -0.5 +0.1
anaerobic N1B4wt with N2E3m denitrifying replicate C -1.2 -0.3 +0.1 +0.2 +0.2
stress Sisomicin 0.008 mg/ml +0.4 -1.2 +0.2 -0.1 -0.2
pH Minimal media pH7 -0.4 +0.4 -0.2 -0.4 -0.2
carbon source L-Ornithine -0.9 +0.3 -0.2 -0.6 +0.7
stress Lomefloxacin 0.001 mM -0.4 -0.3 -0.4 -0.0 +0.5
carbon source L-Phenylalanine (C) -0.2 -0.9 +0.1 +0.2 +0.1
stress Cisplatin 0.006 mg/ml +0.3 -0.7 -0.5 +0.0 +0.2
carbon source L-Serine (C) -0.5 -0.4 +0.2 +0.5 -0.3
stress Tetracycline 0.0016 mg/ml +0.3 -0.5 +0.0 -0.7 +0.4
motility outer cut, LB soft agar motility assay -0.4 +0.7 -0.3 +0.3 -0.4
stress Cobalt chloride 0.16 mM +0.6 +0.4 -0.2 +0.3 -0.3
anaerobic Anaerobic, acetate donor; nitrate and iron -0.0 +1.1 -0.3 -0.3 +0.6
carbon source L-Citrulline +0.5 -0.5 +0.1 +0.5 +0.7
carbon source L-Citrulline -0.0 +0.2 +0.0 +1.0 +0.6
carbon source L-Citrulline +0.1 +0.1 +0.1 +1.0 +0.7
carbon source L-Citrulline (C) -0.1 +0.1 +0.2 +1.5 +1.0
carbon source L-Citrulline +1.2 +0.5 -0.1 +0.7 +0.8
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