Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_24795 and AO353_24800 are separated by 217 nucleotidesAO353_24800 and AO353_24805 are separated by 141 nucleotidesAO353_24805 and AO353_24810 are separated by 92 nucleotidesAO353_24810 and AO353_24815 are separated by 5 nucleotides AO353_24795: AO353_24795 - oxidoreductase, at 5,465,303 to 5,467,264 _24795 AO353_24800: AO353_24800 - spermidine/putrescine ABC transporter substrate-binding protein, at 5,467,482 to 5,468,531 _24800 AO353_24805: AO353_24805 - TetR family transcriptional regulator, at 5,468,673 to 5,469,320 _24805 AO353_24810: AO353_24810 - transcriptional regulator, at 5,469,413 to 5,470,129 _24810 AO353_24815: AO353_24815 - amino acid ABC transporter substrate-binding protein, at 5,470,135 to 5,470,908 _24815
Group Condition AO353_24795 AO353_24800 AO353_24805 AO353_24810 AO353_24815
carbon source L-Ornithine -0.6 -0.5 -1.2 -0.6 -0.5
carbon source L-Citrulline -0.5 -0.4 -1.0 -0.1 -1.0
anaerobic Anaerobic, acetate donor; nitrate and iron -0.1 -0.1 -1.3 +0.4 -1.2
carbon source L-Citrulline (C) -0.1 -0.0 -2.0 -0.3 +0.2
carbon source L-Ornithine -0.6 +0.1 -1.7 +0.0 +0.2
carbon source L-Ornithine -0.6 +0.1 -1.1 -0.6 +0.3
carbon source L-Valine (C) -0.0 -0.0 -0.6 -1.1 -0.1
carbon source L-Phenylalanine (C) -0.2 -0.1 -0.3 -0.3 -0.8
motility outer cut, LB soft agar motility assay +0.0 -0.5 +0.2 -0.5 -1.1
carbon source Uridine (C) -0.2 +0.0 -1.2 -0.3 -0.1
stress Doxycycline hyclate 0.0002 mg/ml -0.1 -0.1 +0.1 -0.7 -0.8
carbon source D-Alanine (C) -0.2 -0.0 -0.5 -0.3 -0.5
carbon source L-Citrulline -0.5 -0.3 -0.6 -0.2 +0.0
carbon source L-Citrulline +0.1 +0.0 -0.6 -0.5 -0.5
motility outer cut, LB soft agar motility assay +0.3 +0.0 -1.1 -0.0 -0.4
motility outer cut, LB soft agar motility assay -0.2 -0.3 -0.3 +0.3 -0.7
carbon source L-Leucine (C) -0.4 +0.3 -0.7 +0.1 -0.4
pH Minimal media pH9 -0.2 -0.4 -0.1 +0.2 -0.6
stress Cisplatin 0.006 mg/ml +0.0 -0.6 -0.4 -0.3 +0.5
carbon source Putrescine (C) +0.1 +0.1 -0.5 -0.7 +0.3
pH Minimal media pH9 +0.1 +0.2 +0.2 -0.5 -0.6
stress Cisplatin 0.006 mg/ml +0.3 -0.3 -0.2 +0.7 -0.1
carbon source L-Ornithine -0.5 -0.1 -0.7 +1.2 +0.5
stress Thallium(I) acetate 0.008 mg/ml +0.4 -0.4 -0.6 +0.2 +0.7
carbon source L-Arginine (C) -0.1 -0.0 -0.5 +0.4 +0.6
stress Cobalt chloride 0.32 mM +0.1 -0.5 +0.2 +0.8 -0.1
carbon source pyruvate (C) +0.2 +0.3 -0.3 +0.4 +0.3
carbon source Tween 20 (C) -0.1 +0.3 -0.1 +0.3 +0.7
nitrogen source L-Lysine (N) -0.0 +0.1 +2.3 +0.4 -0.2
nitrogen source L-Lysine (N) -0.1 +0.1 +2.4 +0.1 +0.3
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