Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_24755 and AO353_24760 are separated by 12 nucleotidesAO353_24760 and AO353_24765 are separated by 108 nucleotidesAO353_24765 and AO353_24770 are separated by 36 nucleotidesAO353_24770 and AO353_24775 overlap by 4 nucleotides AO353_24755: AO353_24755 - ATP-dependent DNA helicase, at 5,455,964 to 5,458,228 _24755 AO353_24760: AO353_24760 - glutamine amidotransferase, at 5,458,241 to 5,459,038 _24760 AO353_24765: AO353_24765 - GCN5 family acetyltransferase, at 5,459,147 to 5,459,644 _24765 AO353_24770: AO353_24770 - FAD-dependent oxidoreductase, at 5,459,681 to 5,460,991 _24770 AO353_24775: AO353_24775 - ABC transporter substrate-binding protein, at 5,460,988 to 5,462,076 _24775
Group Condition AO353_24755 AO353_24760 AO353_24765 AO353_24770 AO353_24775
carbon source L-Proline (C) -0.1 -0.4 -0.6 -0.0 -0.7
nitrogen source Parabanic Acid (N) +0.2 -0.4 -0.4 -0.6 -0.4
carbon source propionate (C) -0.2 -0.7 -0.2 -0.0 -0.5
carbon source L-Citrulline -0.2 -0.6 +0.1 -0.3 -0.3
stress Paraquat dichloride 0.032 mg/mL +0.0 -1.4 +0.1 +0.2 -0.1
stress copper (II) chloride 2.5 mM +0.1 -0.7 -0.4 +0.2 -0.3
denitrifying Nitrate reduction, replicate B +0.0 -1.3 +0.2 +0.4 -0.3
stress Cisplatin 0.006 mg/ml -1.7 +0.4 +0.2 +1.0 -0.7
carbon source pyruvate (C) +0.1 -0.9 +0.3 +0.0 -0.3
pH Minimal media pH9 -0.1 +0.5 -1.0 -0.1 +0.1
stress methylglyoxal 0.009 vol% -0.3 +0.5 -0.2 -0.2 -0.2
carbon source acetate (C) +0.0 -1.2 +0.3 +0.6 -0.2
stress nitrate 200 mM -0.0 -0.5 +0.2 +0.3 -0.4
carbon source L-Tryptophan (C) +0.0 +0.8 -0.9 -0.1 -0.1
motility outer cut, LB soft agar motility assay -0.1 +0.1 -0.7 +0.2 +0.6
carbon source D-Glucose -0.5 +0.7 +0.0 -0.5 +0.3
stress Cisplatin 0.006 mg/ml -1.4 +0.4 +0.5 +0.6 +0.0
nitrogen source L-Arginine (N) -0.1 +0.7 -0.5 +0.2 -0.1
stress 1-ethyl-3-methylimidazolium acetate 30 mM +0.3 -0.8 +0.2 +0.2 +0.3
motility outer cut, LB soft agar motility assay +0.1 +0.5 +0.4 -0.2 -0.4
stress Thallium(I) acetate 0.008 mg/ml +0.2 +0.6 -0.5 +0.4 +0.0
motility outer cut, LB soft agar motility assay +0.4 -0.2 -0.2 +0.4 +0.3
carbon source L-Citrulline -0.2 +0.2 +1.1 -0.3 -0.1
stress Cholin acetate 38 mM +0.2 +0.7 -0.2 -0.1 +0.2
carbon source L-Leucine (C) +0.3 +0.7 +0.3 -0.1 -0.2
stress Choline chloride 358 mM +0.3 +0.8 -0.2 +0.1 -0.1
stress Benzalkonium Chloride 0.012 mg/ml +0.2 +1.0 -0.1 +0.3 -0.3
stress Thallium(I) acetate 0.016 mg/ml +0.0 +0.9 +0.2 +0.5 -0.2
stress Thallium(I) acetate 0.016 mg/ml +0.2 +0.4 +0.3 +0.5 +0.1
stress Doxycycline hyclate 0.0006 mg/ml +0.2 +0.9 -0.1 +0.1 +0.9
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