Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_24695 and AO353_24700 are separated by 215 nucleotidesAO353_24700 and AO353_24705 overlap by 4 nucleotidesAO353_24705 and AO353_24710 are separated by 2 nucleotidesAO353_24710 and AO353_24715 are separated by 69 nucleotides AO353_24695: AO353_24695 - hypothetical protein, at 5,437,126 to 5,437,512 _24695 AO353_24700: AO353_24700 - peptidase, at 5,437,728 to 5,439,521 _24700 AO353_24705: AO353_24705 - hemolysin D, at 5,439,518 to 5,440,852 _24705 AO353_24710: AO353_24710 - peptidase, at 5,440,855 to 5,442,219 _24710 AO353_24715: AO353_24715 - hypothetical protein, at 5,442,289 to 5,445,255 _24715
Group Condition AO353_24695 AO353_24700 AO353_24705 AO353_24710 AO353_24715
carbon source L-Valine (C) +0.1 -1.9 +0.0 -0.1 -0.0
anaerobic Anaerobic, acetate donor; nitrate and iron -0.4 -0.5 -0.5 -0.3 -0.0
carbon source L-Citrulline -0.2 -0.6 -0.6 -0.0 +0.0
stress copper (II) chloride 2.5 mM +0.1 -0.6 -0.5 -0.3 -0.1
carbon source L-Alanine (C) +0.0 -0.6 -0.5 +0.0 -0.2
stress methylglyoxal 0.009 vol% +0.3 -0.4 -0.7 -0.2 +0.0
nitrogen source Thymine (N) -0.2 -1.0 +0.1 +0.2 +0.0
stress Fusidic 0.125 mg/ml -0.0 -0.4 -0.5 +0.2 -0.1
carbon source L-Citrulline -0.2 +0.3 -1.2 +0.1 +0.2
carbon source Tween 20 (C) -0.3 -0.5 +0.2 -0.1 -0.1
carbon source D-Glucose -0.0 -0.8 -0.2 +0.3 +0.2
carbon source pyruvate (C) +0.2 -0.8 +0.2 -0.2 -0.0
lb LB +0.3 -0.8 -0.0 +0.1 +0.1
stress Sisomicin 0.008 mg/ml +0.1 -0.8 -0.1 -0.0 +0.5
survival 4C survival; 672 hrs -0.0 -0.7 -0.1 +0.1 +0.4
carbon source L-Tryptophan (C) +0.1 -0.8 +0.2 +0.1 +0.1
carbon source Ethanol (C) -0.4 +0.4 -0.3 +0.1 +0.1
stress Doxycycline hyclate 0.0002 mg/ml +0.6 -0.3 -0.2 -0.1 -0.0
carbon source L-Ornithine -0.2 +0.5 -0.1 +0.3 -0.2
stress nitrate 200 mM +0.3 +0.4 -0.4 +0.2 -0.2
carbon source L-Ornithine -0.1 +0.3 -0.3 +0.4 +0.1
pH Minimal media pH9 -0.0 -0.5 +0.9 +0.1 +0.0
lb LB -0.1 +0.8 -0.2 -0.0 +0.0
motility outer cut, LB soft agar motility assay +0.2 +0.3 -0.0 +0.5 -0.3
nitrogen source Parabanic Acid (N) +0.2 +0.6 +0.1 -0.2 +0.1
carbon source acetate (C) +0.5 -0.4 +0.4 +0.1 +0.2
nitrogen source L-Glutamic (N) -0.1 +0.7 +0.3 +0.0 +0.1
stress Doxycycline hyclate 0.0006 mg/ml +0.2 +0.7 -0.2 +0.1 +0.2
carbon source L-Citrulline +0.1 +0.8 -0.1 +0.2 +0.2
stress Nalidixic 0.004 mg/ml +0.2 +0.3 +0.5 +0.1 +0.1
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