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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AO353_24625 and AO353_24630 are separated by 507 nucleotides
AO353_24630 and AO353_24635 are separated by 585 nucleotides
AO353_24635 and AO353_24640 are separated by 521 nucleotides
AO353_24640 and AO353_24645 are separated by 1 nucleotides
AO353_24625: AO353_24625 - hypothetical protein, at 5,419,055 to 5,419,558
_24625
AO353_24630: AO353_24630 - hypothetical protein, at 5,420,066 to 5,420,500
_24630
AO353_24635: AO353_24635 - hypothetical protein, at 5,421,086 to 5,421,400
_24635
AO353_24640: AO353_24640 - hypothetical protein, at 5,421,922 to 5,422,335
_24640
AO353_24645: AO353_24645 - hypothetical protein, at 5,422,337 to 5,424,217
_24645
Group
Condition
AO353
_24625
AO353
_24630
AO353
_24635
AO353
_24640
AO353
_24645
motility
outer cut, LB soft agar motility assay
-1.0
+0.1
-1.1
-0.5
-0.1
carbon source
acetate (C)
-1.0
-0.0
-0.5
-0.6
-0.3
carbon source
Ethanol (C)
-1.4
-0.1
-0.3
-0.1
-0.2
carbon source
D-Glucose
-1.2
+0.1
-0.5
-0.5
-0.0
stress
Furfuryl Alcohol 0.25 vol%
-0.7
-0.2
-0.2
-0.6
-0.1
stress
Cisplatin 0.006 mg/ml
-1.0
-0.0
-0.9
+0.4
-0.0
stress
Nickel (II) chloride 0.625 mM
-0.8
+0.0
-0.1
-0.6
+0.0
carbon source
propionate (C)
-0.3
-0.1
-0.6
+0.0
-0.4
carbon source
L-Serine (C)
-0.6
-0.2
-0.1
-0.3
-0.2
carbon source
L-Aspartic Acid (C)
-1.3
-0.0
+0.3
+0.1
-0.4
stress
sodium fluoride 6.25 mM
-0.4
-0.2
-0.2
-0.6
+0.1
nitrogen source
Glycine (N)
-1.3
+0.0
-0.0
-0.1
+0.2
carbon source
L-Citrulline
-1.2
+0.3
-0.1
-0.3
+0.3
stress
Tetracycline 0.0008 mg/ml
-0.6
+0.3
-0.1
-0.5
-0.1
survival
4C survival; 360 hrs
-1.0
-0.0
+0.3
-0.2
-0.1
carbon source
D-Serine (C)
-0.3
-0.4
+0.3
-0.3
-0.2
stress
copper (II) chloride 2.5 mM
-0.6
+0.0
+0.3
-0.4
-0.2
carbon source
L-Citrulline
-1.0
-0.2
+0.3
+0.0
+0.1
pH
Minimal media pH9
-0.2
+0.2
-0.2
-0.5
+0.3
lb
LB
-0.6
+0.0
-0.5
+0.4
+0.1
stress
Dimethyl Sulfoxide 7.5 vol%
-0.7
+0.2
-0.2
+0.2
+0.0
stress
acetate 68 mM
+0.4
-0.1
-0.6
+0.1
-0.2
stress
Cholin acetate 19 mM
+0.5
-0.2
-0.2
-0.3
-0.2
carbon source
L-Citrulline
+0.2
+0.2
-0.5
-0.6
+0.4
nitrogen source
Uridine (N)
-0.5
-0.2
+0.4
-0.0
+0.2
anaerobic
Anaerobic, acetate donor; nitrate and iron
-1.8
+0.2
+0.5
+0.8
+0.3
carbon source
L-Valine (C)
+0.3
+0.1
+0.2
-0.7
+0.3
carbon source
L-Citrulline
+0.6
+0.1
-0.2
-0.4
+0.2
stress
Doxycycline hyclate 0.0006 mg/ml
-0.4
+0.1
+0.2
+0.7
+0.4
nitrogen source
Glycine (N)
+0.6
+0.1
-0.2
+0.3
+0.2
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AO353_24630
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AO353_24635
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