Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_24010 and AO353_24015 are separated by 58 nucleotidesAO353_24015 and AO353_24020 are separated by 228 nucleotidesAO353_24020 and AO353_24025 are separated by 160 nucleotidesAO353_24025 and AO353_24030 overlap by 7 nucleotides AO353_24010: AO353_24010 - Rhizobactin siderophore biosynthesis protein RhbE, at 5,278,818 to 5,280,137 _24010 AO353_24015: AO353_24015 - non ribosomal peptide synthetase BasB, at 5,280,196 to 5,282,364 _24015 AO353_24020: AO353_24020 - RNA polymerase subunit sigma, at 5,282,593 to 5,283,111 _24020 AO353_24025: AO353_24025 - ABC transporter ATP-binding protein, at 5,283,272 to 5,285,062 _24025 AO353_24030: AO353_24030 - ABC transporter ATP-binding protein, at 5,285,056 to 5,286,825 _24030
Group Condition AO353_24010 AO353_24015 AO353_24020 AO353_24025 AO353_24030
survival 4C survival; 672 hrs -0.2 +0.8 -0.6 -1.7 -1.8
stress Cisplatin 0.006 mg/ml -1.0 -0.0 -0.6 -0.7 +0.0
carbon source D-Glucose -0.0 +0.2 -0.9 -0.5 -0.7
carbon source L-Citrulline -0.3 -0.1 -0.0 -0.7 -0.7
carbon source L-Ornithine -0.2 +0.1 -0.5 -0.8 -0.3
carbon source D-Glucose -0.4 -0.1 -0.2 -0.5 -0.5
carbon source L-Citrulline -0.2 -0.0 -0.4 -0.3 -0.7
carbon source L-Ornithine -0.1 +0.1 -0.8 -0.4 -0.2
carbon source L-Citrulline +0.2 +0.2 -0.9 -0.6 -0.1
carbon source L-Ornithine -0.2 +0.1 -0.1 -0.6 -0.4
stress Cisplatin 0.006 mg/ml -1.1 -0.0 -0.4 +0.1 +0.4
stress Thallium(I) acetate 0.016 mg/ml -0.2 +0.1 -0.2 -0.3 -0.2
carbon source L-Citrulline +0.1 +0.3 -0.7 -0.3 -0.0
stress Chlorite 0.16 mM -0.1 +0.1 -0.6 +0.1 -0.2
stress nitrate 200 mM -0.1 +0.3 -0.2 -0.3 -0.4
survival 4C survival; 360 hrs -0.0 +0.5 -0.2 -0.5 -0.4
survival 4C survival; 192 hrs +0.2 +0.3 -0.2 -0.3 -0.5
nitrogen source Parabanic Acid (N) +0.0 -0.5 +0.4 -0.3 -0.1
anaerobic Anaerobic, acetate donor; nitrate and iron -0.4 +0.3 +0.0 -0.5 +0.2
pH Minimal media pH9 -0.2 +0.0 +0.1 +0.3 -0.4
carbon source propionate (C) +0.3 +0.6 -0.2 -0.3 -0.5
denitrifying Nitrate reduction, replicate C +0.2 +0.2 +0.1 -0.2 -0.2
carbon source acetate (C) +0.1 +0.4 +0.2 +0.1 -0.3
stress Doxycycline hyclate 0.0006 mg/ml -0.6 -0.0 +0.2 +0.6 +0.5
stress Tetracycline 0.0008 mg/ml +0.2 -0.0 -0.1 +0.4 +0.3
carbon source acetate (C) +0.1 +1.0 +0.2 +0.2 -0.2
stress Tetracycline 0.0016 mg/ml +0.1 -0.0 +0.1 +0.9 +0.4
stress Nickel (II) chloride 0.625 mM +0.3 +0.7 +0.4 +0.0 +0.1
stress Nickel (II) chloride 0.625 mM +0.5 +1.1 +0.6 +0.1 +0.0
stress Lomefloxacin 0.001 mM +0.0 -0.0 +0.1 +1.8 +0.7
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