Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_23970 and AO353_23975 are separated by 54 nucleotidesAO353_23975 and AO353_23980 overlap by 13 nucleotidesAO353_23980 and AO353_23985 are separated by 390 nucleotidesAO353_23985 and AO353_23990 are separated by 36 nucleotides AO353_23970: AO353_23970 - hypothetical protein, at 5,263,849 to 5,265,135 _23970 AO353_23975: AO353_23975 - diguanylate cyclase, at 5,265,190 to 5,268,210 _23975 AO353_23980: AO353_23980 - sugar ABC transporter substrate-binding protein, at 5,268,198 to 5,269,217 _23980 AO353_23985: AO353_23985 - isochorismate-pyruvate lyase, at 5,269,608 to 5,269,931 _23985 AO353_23990: AO353_23990 - histidine decarboxylase, at 5,269,968 to 5,271,194 _23990
Group Condition AO353_23970 AO353_23975 AO353_23980 AO353_23985 AO353_23990
radiation Ionizing radiation, 126.196 Gy, -0.0 -0.1 -0.3 -0.7 -0.1
motility outer cut, LB soft agar motility assay +0.0 -0.1 -0.7 +0.2 -0.4
stress Paraquat dichloride 0.032 mg/mL +0.1 -0.1 +0.0 -0.7 -0.1
carbon source D-Glucose -0.1 -0.1 -0.1 -0.6 +0.1
stress Cisplatin 0.006 mg/ml -0.1 -0.6 -0.0 -0.3 +0.2
nitrogen source Parabanic Acid (N) -0.4 -0.1 -0.4 +0.1 +0.0
denitrifying Nitrate reduction, replicate C +0.3 +0.3 +0.0 -1.3 -0.1
carbon source L-Valine (C) +0.1 -0.3 +0.2 -0.5 -0.2
stress Doxycycline hyclate 0.0006 mg/ml -0.1 -0.1 -0.9 +0.3 +0.2
stress Doxycycline hyclate 0.0002 mg/ml +0.0 -0.1 -0.7 +0.3 -0.0
carbon source L-Citrulline -0.6 -0.2 +0.1 +0.4 -0.1
carbon source L-Citrulline +0.2 -0.2 +0.1 -0.6 +0.1
nitrogen source L-Lysine (N) +0.2 +0.0 -0.4 +0.1 -0.2
stress Fusidic 0.125 mg/ml -0.2 +0.2 +0.4 -0.5 -0.1
stress Cholin acetate 19 mM -0.1 -0.2 -0.4 +0.4 +0.1
carbon source Ethanol (C) +0.2 +0.0 -0.6 +0.4 -0.0
carbon source L-Leucine (C) +0.0 -0.4 -0.2 +0.7 -0.1
stress Furfuryl Alcohol 0.0625 vol% +0.1 -0.0 +0.5 -0.6 +0.1
carbon source Tween 20 (C) +0.1 +0.1 -0.3 +0.3 -0.1
stress Cisplatin 0.006 mg/ml -0.3 -0.0 -0.2 -0.2 +0.9
carbon source L-Malic (C) -0.0 +0.1 -0.4 +0.6 -0.0
carbon source L-Serine (C) +0.2 -0.1 -0.2 +0.5 -0.1
carbon source m-Inositol (C) +0.1 -0.0 -0.2 +0.7 -0.1
carbon source propionate (C) +0.2 -0.1 +0.3 -0.2 +0.3
carbon source acetate (C) -0.3 +0.3 -0.2 +0.8 -0.1
pH Minimal media pH9 +0.0 -0.3 +0.2 +0.6 +0.1
carbon source D-Glucose +0.0 -0.2 +0.4 +0.5 +0.0
stress Nickel (II) chloride 0.625 mM -0.1 +0.1 +0.0 +0.5 +0.8
stress Nickel (II) chloride 0.625 mM -0.1 -0.1 +0.2 +0.4 +1.0
survival 4C survival; 672 hrs +0.1 +2.0 +1.8 +0.2 -0.5
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