Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_23905 and AO353_23910 are separated by 2 nucleotidesAO353_23910 and AO353_23915 are separated by 179 nucleotidesAO353_23915 and AO353_23920 are separated by 0 nucleotidesAO353_23920 and AO353_23925 overlap by 11 nucleotides AO353_23905: AO353_23905 - GntR family transcriptional regulator, at 5,245,604 to 5,246,482 _23905 AO353_23910: AO353_23910 - response regulator, at 5,246,485 to 5,246,847 _23910 AO353_23915: AO353_23915 - chemotaxis protein CheY, at 5,247,027 to 5,250,494 _23915 AO353_23920: AO353_23920 - chemotaxis protein CheR, at 5,250,495 to 5,251,316 _23920 AO353_23925: AO353_23925 - histidine kinase, at 5,251,306 to 5,252,520 _23925
Group Condition AO353_23905 AO353_23910 AO353_23915 AO353_23920 AO353_23925
carbon source L-Alanine (C) -0.2 -1.8 +0.2 -0.8 -0.7
carbon source acetate (C) -0.7 -0.9 -0.0 -0.4 -0.3
stress Tetracycline 0.0016 mg/ml -0.3 -1.1 -0.1 -0.4 -0.5
carbon source L-Asparagine (C) -0.6 -1.0 +0.0 -0.5 -0.3
motility outer cut, LB soft agar motility assay -1.1 -0.4 +0.1 -0.4 -0.4
stress Lomefloxacin 0.001 mM -0.8 -0.9 +0.2 -0.6 +0.1
nitrogen source L-tyrosine (N) -0.8 -0.4 +0.2 -0.2 -0.8
stress Doxycycline hyclate 0.0006 mg/ml +0.1 -1.3 -0.2 -0.3 -0.1
carbon source Carnitine Hydrochloride (C) -1.0 +0.3 +0.2 -0.5 -0.2
nitrogen source Parabanic Acid (N) -1.7 +0.3 +0.3 -0.1 +0.1
carbon source L-Phenylalanine (C) +0.4 -1.0 +0.2 -0.2 -0.5
nitrogen source Urea (N) -0.5 +0.4 +0.3 -0.4 -0.7
nitrogen source D-Glucosamine Hydrochloride (N) -0.6 +0.5 +0.1 -0.5 -0.5
carbon source L-Tryptophan (C) +0.5 -0.4 +0.4 -0.2 -1.2
nitrogen source Uridine (N) -0.6 +0.4 +0.2 -0.3 -0.6
stress Benzalkonium Chloride 0.012 mg/ml -0.5 +0.7 -0.2 -0.2 -0.6
stress Thallium(I) acetate 0.016 mg/ml +0.5 -1.0 -0.1 +0.2 -0.3
stress Ceftazidime 0.12 mg/ml -0.5 +0.7 -0.2 -0.2 -0.5
carbon source L-Proline (C) -0.7 +0.6 +0.1 -0.2 -0.3
carbon source L-Isoleucine (C) -0.5 +0.6 +0.4 -0.1 -0.9
stress Doxycycline hyclate 0.0002 mg/ml -1.3 +1.2 +0.1 +0.2 -0.5
carbon source m-Inositol (C) -0.5 +0.6 +0.3 -0.2 -0.4
carbon source acetate (C) +0.4 -0.5 -0.4 -0.3 +0.6
motility outer cut, LB soft agar motility assay -0.6 +0.4 +0.5 -0.4 +0.2
stress methylglyoxal 0.009 vol% -0.5 -0.8 +0.1 +0.7 +0.7
stress methylglyoxal 0.008 vol% +0.6 -0.9 +0.3 +0.6 +0.2
survival 4C survival; 672 hrs +0.2 +0.1 -1.3 +0.5 +1.4
stress perchlorate 75 mM -0.2 +0.0 +0.2 +1.2 +0.5
stress nitrate 200 mM -0.0 -0.4 +0.5 +1.1 +0.9
stress Fusidic 0.125 mg/ml +0.2 +0.3 +0.4 +0.6 +0.6
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