Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_23470 and AO353_23475 are separated by 1 nucleotidesAO353_23475 and AO353_23480 overlap by 4 nucleotidesAO353_23480 and AO353_23485 are separated by 256 nucleotidesAO353_23485 and AO353_23490 are separated by 99 nucleotides AO353_23470: AO353_23470 - microcin ABC transporter permease, at 5,140,469 to 5,141,542 _23470 AO353_23475: AO353_23475 - hypothetical protein, at 5,141,544 to 5,143,385 _23475 AO353_23480: AO353_23480 - ABC transporter substrate-binding protein, at 5,143,382 to 5,145,208 _23480 AO353_23485: AO353_23485 - lytic transglycosylase, at 5,145,465 to 5,146,898 _23485 AO353_23490: AO353_23490 - hydroxyacylglutathione hydrolase, at 5,146,998 to 5,147,765 _23490
Group Condition AO353_23470 AO353_23475 AO353_23480 AO353_23485 AO353_23490
stress methylglyoxal 0.008 vol% +0.0 +0.1 -0.3 +0.6 -4.6
stress methylglyoxal 0.009 vol% -0.0 +0.0 -0.3 +1.0 -4.3
motility outer cut, LB soft agar motility assay -0.8 -0.6 -0.2 -1.3 +0.1
motility outer cut, LB soft agar motility assay -0.2 -0.5 -0.2 -1.1 -0.4
motility outer cut, LB soft agar motility assay +0.2 -0.4 -0.1 -1.2 -0.2
survival 4C survival; 672 hrs -0.7 -0.6 +0.1 -0.3 -0.3
stress Vancomycin 1 mg/ml -0.1 -0.0 -0.0 -0.7 -0.4
stress Paraquat dichloride 0.032 mg/mL -0.8 -0.2 -0.0 +0.1 -0.3
survival 4C survival; 360 hrs -0.4 -0.2 +0.2 -0.3 -0.2
stress Nickel (II) chloride 0.625 mM -0.4 -0.2 -0.1 +0.4 -0.3
stress Sisomicin 0.008 mg/ml +0.3 +0.5 -0.1 -1.1 -0.2
carbon source Ethanol (C) +0.2 -0.5 +0.4 -0.1 -0.3
stress 1-ethyl-3-methylimidazolium acetate 15 mM -0.3 -0.4 -0.1 +0.5 +0.3
stress Benzethonium chloride 0.025 mM +0.3 +0.1 +0.3 -0.6 +0.2
stress Benzalkonium Chloride 0.012 mg/ml +0.4 +0.3 -0.1 -0.8 +0.4
carbon source L-Citrulline -0.1 +0.4 -0.1 +0.3 +0.6
anaerobic N1B4wt with N2E3m denitrifying replicate C +0.3 +0.4 +0.3 -0.1 +0.2
stress 1-ethyl-3-methylimidazolium acetate 30 mM +0.2 -0.4 +0.1 +1.0 +0.3
stress Nalidixic 0.004 mg/ml -0.1 -0.1 +0.2 +0.8 +0.5
stress Tetracycline 0.0008 mg/ml -0.2 +0.1 +0.3 +1.0 +0.2
stress perchlorate 75 mM +0.4 +0.5 +0.0 +0.5 +0.1
stress Rifampicin 0.005 mg/ml +0.2 +0.2 -0.0 +0.6 +0.6
stress Cisplatin 0.006 mg/ml +0.6 +0.1 -0.4 +1.1 +0.5
stress nitrate 200 mM +0.7 +0.8 +0.3 -0.0 +0.2
stress Fusidic 0.125 mg/ml +0.0 +0.4 +0.2 +0.9 +0.6
stress Cisplatin 0.006 mg/ml +0.2 +0.1 +0.2 +1.3 +0.6
stress Tetracycline 0.0016 mg/ml -0.3 +0.1 +0.1 +1.9 +0.5
stress Doxycycline hyclate 0.0002 mg/ml +0.1 +0.1 +0.4 +1.7 +0.3
stress Doxycycline hyclate 0.0006 mg/ml +0.2 +0.1 +0.1 +2.4 +1.1
stress Lomefloxacin 0.001 mM -0.2 +0.4 +0.5 +2.5 +1.1
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