Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_23465 and AO353_23470 are separated by 1 nucleotidesAO353_23470 and AO353_23475 are separated by 1 nucleotidesAO353_23475 and AO353_23480 overlap by 4 nucleotidesAO353_23480 and AO353_23485 are separated by 256 nucleotides AO353_23465: AO353_23465 - ABC transporter permease, at 5,139,448 to 5,140,467 _23465 AO353_23470: AO353_23470 - microcin ABC transporter permease, at 5,140,469 to 5,141,542 _23470 AO353_23475: AO353_23475 - hypothetical protein, at 5,141,544 to 5,143,385 _23475 AO353_23480: AO353_23480 - ABC transporter substrate-binding protein, at 5,143,382 to 5,145,208 _23480 AO353_23485: AO353_23485 - lytic transglycosylase, at 5,145,465 to 5,146,898 _23485
Group Condition AO353_23465 AO353_23470 AO353_23475 AO353_23480 AO353_23485
motility outer cut, LB soft agar motility assay -1.1 -0.8 -0.6 -0.2 -1.3
motility outer cut, LB soft agar motility assay -0.5 -0.2 -0.5 -0.2 -1.1
survival 4C survival; 672 hrs -0.5 -0.7 -0.6 +0.1 -0.3
motility outer cut, LB soft agar motility assay -0.2 +0.2 -0.4 -0.1 -1.2
carbon source acetate (C) -0.7 -0.1 -0.4 +0.2 +0.3
stress acetate 17 mM -0.4 -0.2 -0.3 -0.2 +0.4
stress 1-ethyl-3-methylimidazolium acetate 15 mM -0.4 -0.3 -0.4 -0.1 +0.5
stress acetate 34 mM -0.4 -0.2 -0.4 -0.0 +0.5
stress Cholin acetate 38 mM -0.5 -0.1 -0.3 +0.1 +0.4
stress Sisomicin 0.008 mg/ml +0.1 +0.3 +0.5 -0.1 -1.1
stress Nickel (II) chloride 0.625 mM +0.2 -0.4 -0.2 -0.1 +0.4
stress Cholin acetate 19 mM -0.7 -0.1 +0.1 +0.0 +0.7
stress Benzalkonium Chloride 0.012 mg/ml +0.1 +0.4 +0.3 -0.1 -0.8
carbon source Ethanol (C) +0.2 +0.2 -0.5 +0.4 -0.1
stress Nalidixic 0.004 mg/ml -0.3 -0.1 -0.1 +0.2 +0.8
stress 1-ethyl-3-methylimidazolium acetate 30 mM -0.4 +0.2 -0.4 +0.1 +1.0
stress Benzethonium chloride 0.025 mM +0.5 +0.3 +0.1 +0.3 -0.6
carbon source L-Citrulline +0.5 -0.4 +0.3 +0.2 +0.2
stress methylglyoxal 0.009 vol% +0.2 -0.0 +0.0 -0.3 +1.0
anaerobic N1B4wt with N2E3m denitrifying replicate C +0.3 +0.3 +0.4 +0.3 -0.1
stress Tetracycline 0.0008 mg/ml -0.0 -0.2 +0.1 +0.3 +1.0
stress Cisplatin 0.006 mg/ml -0.4 +0.2 +0.1 +0.2 +1.3
stress Cisplatin 0.006 mg/ml +0.2 +0.6 +0.1 -0.4 +1.1
stress perchlorate 75 mM +0.3 +0.4 +0.5 +0.0 +0.5
stress Fusidic 0.125 mg/ml +0.2 +0.0 +0.4 +0.2 +0.9
stress Tetracycline 0.0016 mg/ml -0.1 -0.3 +0.1 +0.1 +1.9
stress Doxycycline hyclate 0.0002 mg/ml +0.1 +0.1 +0.1 +0.4 +1.7
stress nitrate 200 mM +0.7 +0.7 +0.8 +0.3 -0.0
stress Lomefloxacin 0.001 mM -0.3 -0.2 +0.4 +0.5 +2.5
stress Doxycycline hyclate 0.0006 mg/ml +0.4 +0.2 +0.1 +0.1 +2.4
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