Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_23180 and AO353_23185 are separated by 39 nucleotidesAO353_23185 and AO353_23190 are separated by 350 nucleotidesAO353_23190 and AO353_23195 are separated by 138 nucleotidesAO353_23195 and AO353_23200 are separated by 25 nucleotides AO353_23180: AO353_23180 - nitrate ABC transporter substrate-binding protein, at 5,085,258 to 5,086,259 _23180 AO353_23185: AO353_23185 - ABC transporter ATP-binding protein, at 5,086,299 to 5,087,135 _23185 AO353_23190: AO353_23190 - LacI family transcriptional regulator, at 5,087,486 to 5,088,544 _23190 AO353_23195: AO353_23195 - AP endonuclease, at 5,088,683 to 5,089,606 _23195 AO353_23200: AO353_23200 - oxidoreductase, at 5,089,632 to 5,090,801 _23200
Group Condition AO353_23180 AO353_23185 AO353_23190 AO353_23195 AO353_23200
stress Cisplatin 0.006 mg/ml +0.3 N.D. -0.7 -0.3 -0.7
carbon source L-Alanine (C) -0.1 N.D. -0.2 -0.5 -0.1
pH Minimal media pH9 -0.3 N.D. -0.3 -0.4 +0.1
carbon source D-Glucose -0.8 N.D. +0.1 +0.4 -0.5
denitrifying Nitrate reduction, replicate B -0.7 N.D. +0.0 +0.2 -0.1
carbon source D-Trehalose (C) -0.1 N.D. +0.1 -0.3 -0.3
stress methylglyoxal 0.008 vol% -0.3 N.D. -0.3 -0.2 +0.2
nitrogen source Parabanic Acid (N) -0.6 N.D. +0.2 +0.0 -0.1
carbon source L-Citrulline -0.4 N.D. +0.2 -0.4 +0.1
lb LB +0.1 N.D. -0.4 +0.3 -0.2
carbon source L-Ornithine -0.3 N.D. +0.1 +0.3 -0.3
stress Cisplatin 0.006 mg/ml +0.5 N.D. -0.8 -0.2 +0.4
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.4 N.D. -0.1 +0.2 +0.2
stress Benzalkonium Chloride 0.012 mg/ml -0.4 N.D. +0.3 +0.1 -0.1
carbon source L-Ornithine -0.4 N.D. +0.4 +0.3 -0.3
motility outer cut, LB soft agar motility assay -0.8 N.D. +0.1 +0.3 +0.5
stress Thallium(I) acetate 0.008 mg/ml +0.4 N.D. -0.4 +0.1 -0.0
stress 1-ethyl-3-methylimidazolium acetate 30 mM -0.4 N.D. +0.2 -0.0 +0.3
stress copper (II) chloride 2.5 mM +0.3 N.D. +0.2 -0.5 +0.0
stress Fusidic 0.125 mg/ml +0.4 N.D. +0.2 -0.5 +0.2
stress Thallium(I) acetate 0.008 mg/ml +0.7 N.D. -0.4 -0.2 +0.1
carbon source propionate (C) +0.7 N.D. -0.1 -0.1 -0.1
stress Choline Lysine 12 mM -0.2 N.D. +0.2 +0.3 +0.3
survival 4C survival; 672 hrs -0.1 N.D. +0.4 +0.3 +0.0
stress Furfuryl Alcohol 0.25 vol% +0.2 N.D. +0.2 +0.4 -0.2
stress Doxycycline hyclate 0.0006 mg/ml +0.0 N.D. +0.4 -0.3 +0.5
motility outer cut, LB soft agar motility assay +0.1 N.D. +0.0 +0.9 -0.4
stress Sisomicin 0.008 mg/ml +0.3 N.D. -0.0 +0.6 -0.1
carbon source propionate (C) +0.6 N.D. +0.2 +0.2 +0.0
carbon source L-Ornithine +0.3 N.D. +0.2 +0.5 -0.1
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