Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_23155 and AO353_23160 overlap by 10 nucleotidesAO353_23160 and AO353_23165 are separated by 4 nucleotidesAO353_23165 and AO353_23170 are separated by 13 nucleotidesAO353_23170 and AO353_23175 overlap by 1 nucleotides AO353_23155: AO353_23155 - IclR family transcriptional regulator, at 5,081,390 to 5,082,232 _23155 AO353_23160: AO353_23160 - hydrolase, at 5,082,223 to 5,083,107 _23160 AO353_23165: AO353_23165 - cupin, at 5,083,112 to 5,083,675 _23165 AO353_23170: AO353_23170 - short-chain dehydrogenase, at 5,083,689 to 5,084,453 _23170 AO353_23175: AO353_23175 - ABC transporter permease, at 5,084,453 to 5,085,229 _23175
Group Condition AO353_23155 AO353_23160 AO353_23165 AO353_23170 AO353_23175
nitrogen source D-Glucosamine Hydrochloride (N) -0.4 -0.3 -0.6 -1.1 -0.1
motility outer cut, LB soft agar motility assay -0.6 -0.3 -0.8 -0.6 -0.0
stress acetate 34 mM -0.2 -0.5 -1.3 -0.2 -0.2
carbon source L-Tryptophan (C) +0.8 -0.3 -2.0 -0.6 -0.1
pH Minimal media pH9 -0.2 -0.5 -1.2 -0.5 +0.2
stress 1-ethyl-3-methylimidazolium acetate 30 mM -0.3 -0.6 -0.8 -0.4 +0.1
stress Doxycycline hyclate 0.0006 mg/ml -1.8 +1.0 -1.1 +0.6 -0.6
stress Fusidic 0.125 mg/ml -0.8 -0.6 -0.8 +0.1 +0.2
stress Sisomicin 0.008 mg/ml -1.2 -1.0 +0.4 -0.4 +0.2
carbon source L-Valine (C) -0.0 +0.3 -1.9 +0.1 -0.3
pH Minimal media pH6 -1.2 -0.4 +0.3 -0.4 +0.1
denitrifying Nitrate reduction, replicate B -1.6 -0.5 -0.2 +0.6 +0.2
carbon source L-Aspartic Acid (C) -0.5 -0.6 -0.2 +0.4 -0.4
stress Thallium(I) acetate 0.008 mg/ml -0.4 +0.5 -0.7 -0.4 -0.1
stress Cisplatin 0.006 mg/ml +0.3 +0.4 -0.8 -1.0 +0.4
pH Minimal media pH9 -0.3 -0.5 +0.9 +0.4 -0.8
lb LB +0.6 +0.3 -0.7 -0.7 +0.4
carbon source L-Ornithine -1.3 +0.3 +0.0 +0.3 +0.6
stress Thallium(I) acetate 0.016 mg/ml +0.2 +0.4 -0.9 -0.2 +0.6
stress Thallium(I) acetate 0.016 mg/ml +0.8 +0.5 -0.8 -0.3 +0.2
carbon source L-Isoleucine (C) -0.9 -0.1 +1.0 +0.1 +0.4
stress Cisplatin 0.006 mg/ml +0.9 +0.3 -0.8 -0.1 +0.4
motility outer cut, LB soft agar motility assay +0.1 +0.2 -1.1 +1.5 +0.3
anaerobic Anaerobic, acetate donor; nitrate and iron +0.2 +0.3 +1.6 -0.8 +0.2
carbon source propionate (C) -0.2 +0.9 +0.3 +0.5 +0.5
carbon source Uridine (C) +0.4 +0.3 +0.8 +0.3 +0.4
carbon source propionate (C) +0.2 +0.7 +0.7 +0.2 +0.5
carbon source acetate (C) +0.4 +0.4 +0.8 +0.7 +0.3
carbon source acetate (C) -0.4 +0.5 +1.3 +0.4 +0.7
carbon source Cytidine (C) +0.3 +0.7 +0.9 +0.2 +0.6
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