Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_22945 and AO353_22950 are separated by 84 nucleotidesAO353_22950 and AO353_22955 are separated by 227 nucleotidesAO353_22955 and AO353_22960 are separated by 155 nucleotidesAO353_22960 and AO353_22965 are separated by 0 nucleotides AO353_22945: AO353_22945 - glycogen branching protein, at 5,038,953 to 5,041,187 _22945 AO353_22950: AO353_22950 - universal stress protein UspA, at 5,041,272 to 5,042,138 _22950 AO353_22955: AO353_22955 - tRNA hydroxylase, at 5,042,366 to 5,042,977 _22955 AO353_22960: AO353_22960 - transcriptional regulator, at 5,043,133 to 5,043,840 _22960 AO353_22965: AO353_22965 - ATPase, at 5,043,841 to 5,045,118 _22965
Group Condition AO353_22945 AO353_22950 AO353_22955 AO353_22960 AO353_22965
nitrogen source Gly-Glu (N) -4.1 +0.1 +0.0 -0.1 -0.4
nitrogen source Gly-DL-Asp (N) -3.3 -0.5 -0.3 -0.1 +0.1
nitrogen source Urea (N) -3.6 -0.7 +0.5 -0.1 -0.0
nitrogen source NAG (N) -4.4 +0.1 +0.2 +0.4 -0.2
nitrogen source Thymine (N) -4.1 -0.1 +0.3 +0.1 -0.2
nitrogen source Inosine (N) -2.9 -0.2 -0.4 -0.3 +0.0
nitrogen source L-Lysine (N) -3.6 +0.0 +0.2 -0.2 -0.1
nitrogen source Uridine (N) -4.0 +0.3 -0.0 -0.0 +0.1
nitrogen source L-tyrosine (N) -3.7 -0.3 +0.5 -0.0 -0.2
nitrogen source L-Phenylalanine (N) -3.6 -0.2 +0.3 +0.2 -0.2
nitrogen source L-Lysine (N) -3.2 +0.0 -0.3 -0.1 +0.1
nitrogen source Carnitine Hydrochloride (N) -3.0 -0.2 +0.0 -0.1 -0.1
nitrogen source D-Glucosamine Hydrochloride (N) -4.0 +0.1 +0.5 +0.1 -0.0
nitrogen source L-Tryptophan (N) -3.0 -0.2 +0.3 -0.2 -0.1
nitrogen source L-Threonine (N) -3.5 +0.2 +0.1 +0.1 -0.0
carbon source L-Phenylalanine (C) -0.0 -1.1 -1.3 +0.1 -0.3
carbon source Ethanol (C) -1.6 +0.1 -0.6 -0.6 +0.0
nitrogen source L-Threonine (N) -3.0 +0.1 -0.1 +0.3 +0.2
nitrogen source Parabanic Acid (N) -3.1 +0.4 +0.6 -0.6 +0.1
carbon source D-Ribose (C) -2.8 +0.6 +0.3 -0.2 -0.0
anaerobic Anaerobic, acetate donor; nitrate and iron +0.7 +1.2 -4.1 +0.3 +0.1
carbon source D-Ribose (C) -2.5 +0.1 +0.5 +0.2 +0.0
carbon source L-Ornithine -0.2 -1.4 +0.7 -0.0 -0.5
anaerobic N1B4wt with N2E3m denitrifying replicate C -1.6 -0.1 +0.5 -0.3 +0.1
carbon source butyrate (C) -1.6 +0.4 -0.0 +0.2 -0.3
stress Polymyxin B sulfate 4 mg/ml -0.2 +0.3 +0.7 -0.4 -1.4
motility outer cut, LB soft agar motility assay -0.3 +0.6 -0.5 +0.2 -1.0
carbon source L-Ornithine -0.4 +0.5 -0.9 -0.3 +0.2
stress Cisplatin 0.006 mg/ml +0.0 -0.8 +1.6 +0.2 -0.3
stress Sisomicin 0.008 mg/ml -0.0 +0.1 +1.7 +0.7 -0.5
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