Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_22925 and AO353_22930 are separated by 195 nucleotidesAO353_22930 and AO353_22935 are separated by 207 nucleotidesAO353_22935 and AO353_22940 are separated by 181 nucleotidesAO353_22940 and AO353_22945 overlap by 4 nucleotides AO353_22925: AO353_22925 - (Fe-S)-binding protein, at 5,031,387 to 5,032,799 _22925 AO353_22930: AO353_22930 - hypothetical protein, at 5,032,995 to 5,033,228 _22930 AO353_22935: AO353_22935 - alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase, at 5,033,436 to 5,035,433 _22935 AO353_22940: AO353_22940 - alpha-amylase, at 5,035,615 to 5,038,956 _22940 AO353_22945: AO353_22945 - glycogen branching protein, at 5,038,953 to 5,041,187 _22945
Group Condition AO353_22925 AO353_22930 AO353_22935 AO353_22940 AO353_22945
nitrogen source Gly-Glu (N) -0.1 -1.0 -1.5 -0.2 -4.1
nitrogen source D-Glucosamine Hydrochloride (N) +0.0 -0.0 -0.9 -0.8 -4.0
nitrogen source Thymine (N) +0.1 -0.6 -0.5 -0.6 -4.1
nitrogen source Gly-DL-Asp (N) +0.1 +0.4 -2.1 -0.5 -3.3
nitrogen source NAG (N) -0.1 -0.2 -0.4 +0.1 -4.4
nitrogen source Uridine (N) -0.3 +0.2 -0.4 -0.1 -4.0
nitrogen source Parabanic Acid (N) -0.2 -0.6 -0.2 -0.1 -3.1
nitrogen source L-tyrosine (N) -0.1 -0.6 +0.0 +0.0 -3.7
nitrogen source L-Threonine (N) +0.0 -0.8 -0.2 -0.1 -3.0
nitrogen source Urea (N) -0.0 +0.0 -0.3 -0.1 -3.6
nitrogen source L-Phenylalanine (N) +0.1 -0.5 -0.4 +0.5 -3.6
nitrogen source L-Lysine (N) -0.0 +0.3 -0.3 -0.3 -3.6
nitrogen source L-Lysine (N) -0.0 -0.2 -0.3 -0.1 -3.2
nitrogen source L-Threonine (N) -0.2 +0.2 -0.1 -0.1 -3.5
nitrogen source L-Tryptophan (N) +0.0 -0.3 -0.2 -0.0 -3.0
carbon source D-Ribose (C) -0.1 -0.2 -0.2 -0.0 -2.8
anaerobic N1B4wt with N2E3m denitrifying replicate C +0.2 -0.5 -1.6 +0.2 -1.6
nitrogen source Carnitine Hydrochloride (N) -0.1 -0.1 -0.1 +0.0 -3.0
carbon source D-Ribose (C) +0.0 -0.3 -0.2 -0.1 -2.5
carbon source butyrate (C) -0.2 -0.5 -0.5 -0.2 -1.6
carbon source Ethanol (C) -0.1 -0.1 -0.9 -0.2 -1.4
nitrogen source Inosine (N) +0.1 +0.5 -0.0 -0.0 -2.9
carbon source Uridine (C) -0.2 -0.5 -0.4 -0.0 -1.2
motility outer cut, LB soft agar motility assay -0.6 -0.9 -0.6 +0.0 -0.3
carbon source L-Citrulline +0.1 -2.4 +0.3 -0.0 -0.3
nitrogen source Adenine (N) -0.1 -0.8 -0.1 +0.0 -1.2
carbon source L-Citrulline +0.2 -1.4 -0.1 -0.3 -0.5
carbon source Ethanol (C) +0.3 +0.3 -0.6 -0.1 -1.6
carbon source L-Ornithine +0.6 -1.4 -0.2 -0.0 -0.3
denitrifying Nitrate reduction, replicate C +0.6 +1.0 +0.2 -0.0 -0.5
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