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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E3
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500 nt
AO353_22800 and AO353_22805 are separated by 521 nucleotides
AO353_22805 and AO353_22810 are separated by 15 nucleotides
AO353_22810 and AO353_22815 are separated by 77 nucleotides
AO353_22815 and AO353_22820 are separated by 504 nucleotides
AO353_22800: AO353_22800 - sulfite reductase, at 4,995,573 to 4,997,231
_22800
AO353_22805: AO353_22805 - LacI family transcriptional regulator, at 4,997,753 to 4,998,838
_22805
AO353_22810: AO353_22810 - hypothetical protein, at 4,998,854 to 4,999,072
_22810
AO353_22815: AO353_22815 - hypothetical protein, at 4,999,150 to 4,999,506
_22815
AO353_22820: AO353_22820 - NAD-glutamate dehydrogenase, at 5,000,011 to 5,004,912
_22820
Group
Condition
AO353
_22800
AO353
_22805
AO353
_22810
AO353
_22815
AO353
_22820
carbon source
L-Citrulline (C)
-4.5
-0.1
-0.6
N.D.
-4.4
carbon source
L-Citrulline
-2.8
+0.5
-2.4
N.D.
-2.2
carbon source
L-Ornithine
-2.1
+0.2
-1.8
N.D.
-3.2
carbon source
L-Arginine (C)
-3.2
-0.0
+0.1
N.D.
-3.4
carbon source
L-Arginine (C)
-3.0
-0.1
+0.2
N.D.
-3.4
carbon source
propionate (C)
-4.1
-0.0
-1.4
N.D.
-0.5
carbon source
D-Gluconic Acid (C)
-5.2
-0.0
-0.8
N.D.
+0.1
carbon source
L-Proline (C)
-2.5
-0.0
-0.2
N.D.
-3.1
carbon source
L-Ornithine
-2.5
+0.1
-0.2
N.D.
-3.0
carbon source
L-Leucine (C)
-1.5
-0.3
-2.3
N.D.
-1.6
carbon source
L-Citrulline
-2.2
-0.1
-1.0
N.D.
-2.4
carbon source
L-Ornithine
-2.4
+0.4
-0.2
N.D.
-3.3
carbon source
L-Citrulline
-2.7
+0.3
-1.0
N.D.
-2.1
carbon source
L-Phenylalanine (C)
-3.7
-0.0
-1.6
N.D.
+0.0
nitrogen source
L-Citrulline (N)
-3.6
-0.0
-1.1
N.D.
-0.4
carbon source
D-Glucose (C)
-3.7
-0.1
-1.5
N.D.
+0.1
carbon source
D-Lactate (C)
-4.9
-0.2
-0.0
N.D.
+0.2
nitrogen source
L-Arginine (N)
-3.6
+0.1
-1.3
N.D.
-0.1
carbon source
L-Alanine (C)
-3.5
-0.5
-0.7
N.D.
-0.2
nitrogen source
L-Histidine (N)
-3.7
+0.1
-1.2
N.D.
-0.0
carbon source
L-Proline (C)
-2.0
+0.1
+0.8
N.D.
-3.6
nitrogen source
L-Glutamine (N)
-4.2
-0.1
-0.2
N.D.
-0.2
nitrogen source
L-Arginine (N)
-3.4
-0.1
-1.0
N.D.
-0.1
carbon source
Carnitine Hydrochloride (C)
-4.1
-0.2
-0.7
N.D.
+0.3
carbon source
D-Lactate (C)
-3.9
+0.0
-0.8
N.D.
+0.1
carbon source
D-Glucose (C)
-3.8
-0.1
-0.7
N.D.
+0.1
carbon source
L-Tryptophan (C)
-3.2
-0.2
-1.1
N.D.
+0.3
carbon source
acetate (C)
-2.4
+0.4
-2.3
N.D.
+0.4
pH
Minimal media pH9
-3.4
+0.2
-1.0
N.D.
+0.4
carbon source
L-Citrulline
-2.8
+0.3
+0.9
N.D.
-2.0
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