Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_22735 and AO353_22740 are separated by 77 nucleotidesAO353_22740 and AO353_22745 are separated by 112 nucleotidesAO353_22745 and AO353_22750 are separated by 139 nucleotidesAO353_22750 and AO353_22755 are separated by 822 nucleotides AO353_22735: AO353_22735 - hypothetical protein, at 4,978,544 to 4,978,783 _22735 AO353_22740: AO353_22740 - sterol desaturase, at 4,978,861 to 4,980,015 _22740 AO353_22745: AO353_22745 - LysR family transcriptional regulator, at 4,980,128 to 4,980,991 _22745 AO353_22750: AO353_22750 - glucosidase, at 4,981,131 to 4,983,755 _22750 AO353_22755: AO353_22755 - hypothetical protein, at 4,984,578 to 4,985,552 _22755
Group Condition AO353_22735 AO353_22740 AO353_22745 AO353_22750 AO353_22755
motility outer cut, LB soft agar motility assay -1.5 -0.1 -0.3 +0.1 -0.1
carbon source D-Alanine (C) -1.7 +0.1 +0.0 -0.0 -0.2
carbon source L-Leucine (C) -0.3 -0.3 -0.5 -0.3 +0.1
nitrogen source nitrite (N) +0.2 -0.2 -1.2 -0.0 -0.1
carbon source L-Isoleucine (C) -0.2 -0.9 -0.0 +0.1 -0.1
motility outer cut, LB soft agar motility assay -0.2 -1.0 -0.4 +0.0 +0.5
stress sodium fluoride 6.25 mM -0.6 -0.5 -0.2 +0.1 +0.3
stress Gentamicin 0.006 mg/ml -1.2 +0.2 +0.1 +0.0 +0.0
stress Cisplatin 0.006 mg/ml -1.4 +0.3 +0.3 +0.0 -0.0
lb LB -0.6 -0.5 +0.4 +0.0 -0.0
stress Lomefloxacin 0.001 mM -1.0 +0.0 +0.3 -0.1 +0.1
stress Vancomycin 1 mg/ml +0.5 -0.7 -0.1 -0.1 -0.0
stress Cholin acetate 10 mM -0.3 -0.5 +0.3 +0.0 +0.1
carbon source L-Tryptophan (C) +0.4 -0.8 -0.1 +0.0 +0.1
carbon source L-Citrulline +0.2 -0.2 -0.5 +0.2 -0.2
stress 1-ethyl-3-methylimidazolium acetate 30 mM -0.8 -0.2 +0.3 +0.1 +0.1
carbon source pyruvate (C) +0.4 -0.6 -0.1 -0.2 +0.2
carbon source m-Inositol (C) +0.1 -0.6 +0.3 +0.3 -0.2
stress Sisomicin 0.008 mg/ml -0.7 +0.3 +0.2 -0.0 +0.4
pH Minimal media pH9 +0.6 -0.2 -0.2 +0.2 -0.1
carbon source L-Citrulline -0.4 +0.5 -0.0 +0.3 +0.0
stress Paraquat dichloride 0.032 mg/mL +1.0 -0.2 -0.2 +0.2 -0.0
stress A22 0.01 mg/ml +0.7 +0.2 +0.1 -0.2 +0.1
carbon source L-Ornithine +0.7 -0.0 -0.2 +0.2 +0.2
radiation Ionizing radiation, 126.196 Gy, +1.3 -0.4 +0.1 +0.0 -0.0
carbon source L-Citrulline +0.8 +0.5 -0.2 +0.2 -0.3
carbon source acetate (C) +1.0 +0.5 +0.2 -0.1 -0.1
survival 4C survival; 672 hrs +1.1 +0.1 +0.0 +0.3 +0.1
stress Doxycycline hyclate 0.0006 mg/ml +1.1 +0.1 +0.5 -0.2 +0.1
carbon source L-Ornithine +0.8 +0.4 +0.0 +0.2 +0.2
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