Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_22720 and AO353_22725 are separated by 30 nucleotidesAO353_22725 and AO353_22730 overlap by 4 nucleotidesAO353_22730 and AO353_22735 are separated by 208 nucleotidesAO353_22735 and AO353_22740 are separated by 77 nucleotides AO353_22720: AO353_22720 - curli production assembly protein CsgG, at 4,976,597 to 4,977,277 _22720 AO353_22725: AO353_22725 - hypothetical protein, at 4,977,308 to 4,977,679 _22725 AO353_22730: AO353_22730 - hypothetical protein, at 4,977,676 to 4,978,335 _22730 AO353_22735: AO353_22735 - hypothetical protein, at 4,978,544 to 4,978,783 _22735 AO353_22740: AO353_22740 - sterol desaturase, at 4,978,861 to 4,980,015 _22740
Group Condition AO353_22720 AO353_22725 AO353_22730 AO353_22735 AO353_22740
carbon source D-Alanine (C) -0.4 -0.2 +0.1 -1.7 +0.1
stress sodium fluoride 6.25 mM -0.5 -0.3 +0.0 -0.6 -0.5
stress Cisplatin 0.006 mg/ml -0.4 -0.2 -0.3 -1.4 +0.3
nitrogen source Parabanic Acid (N) +0.1 -0.6 +0.0 -0.7 -0.3
stress copper (II) chloride 2.5 mM -0.1 -0.6 +0.1 +0.1 -0.8
carbon source L-Isoleucine (C) +0.2 -0.1 -0.3 -0.2 -0.9
carbon source L-Tryptophan (C) +0.2 -0.5 -0.6 +0.4 -0.8
motility outer cut, LB soft agar motility assay -0.3 +0.2 +0.4 -1.5 -0.1
anaerobic Anaerobic, acetate donor; nitrate and iron +0.3 -0.6 +0.1 -0.2 -0.6
carbon source m-Inositol (C) -0.7 +0.4 -0.2 +0.1 -0.6
carbon source pyruvate (C) -0.3 -0.4 +0.1 +0.4 -0.6
motility outer cut, LB soft agar motility assay -0.3 +0.2 +0.4 -0.2 -1.0
carbon source L-Citrulline +0.2 -1.0 -0.1 +0.2 -0.2
stress Furfuryl Alcohol 0.125 vol% +0.4 +0.1 -0.1 -1.0 -0.1
stress Vanillin 1.25 mM +0.4 -0.2 +0.0 -0.9 +0.1
carbon source L-Citrulline +0.3 -0.4 -0.5 -0.4 +0.5
stress Gentamicin 0.006 mg/ml +0.3 +0.2 +0.1 -1.2 +0.2
stress 1-ethyl-3-methylimidazolium acetate 30 mM +0.3 +0.4 -0.1 -0.8 -0.2
stress Paraquat dichloride 0.032 mg/mL -0.3 -0.4 -0.3 +1.0 -0.2
pH Minimal media pH9 +0.7 -0.6 +0.3 +0.2 -0.4
stress Doxycycline hyclate 0.0006 mg/ml +0.1 -0.6 -0.2 +1.1 +0.1
carbon source acetate (C) +0.5 -0.6 -0.4 +1.0 +0.5
radiation Ionizing radiation, 126.196 Gy, +0.4 -0.0 -0.3 +1.3 -0.4
motility outer cut, LB soft agar motility assay -0.8 +0.9 +0.3 +0.6 +0.0
carbon source L-Ornithine -0.3 -0.4 +0.5 +0.8 +0.4
carbon source L-Ornithine +0.5 +0.3 -0.3 +0.7 -0.0
stress Fusidic 0.125 mg/ml -0.2 +0.2 +0.3 +0.6 +0.4
carbon source L-Ornithine +0.5 +0.3 +0.2 +0.3 +0.3
carbon source L-Citrulline +0.3 +0.3 -0.2 +0.8 +0.5
survival 4C survival; 672 hrs +0.6 +0.4 -0.1 +1.1 +0.1
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