Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_22330 and AO353_22335 are separated by 91 nucleotidesAO353_22335 and AO353_22340 are separated by 361 nucleotidesAO353_22340 and AO353_22345 overlap by 32 nucleotidesAO353_22345 and AO353_22350 are separated by 60 nucleotides AO353_22330: AO353_22330 - AraC family transcriptional regulator, at 4,889,895 to 4,890,815 _22330 AO353_22335: AO353_22335 - aldehyde dehydrogenase, at 4,890,907 to 4,892,379 _22335 AO353_22340: AO353_22340 - GfdT protein, at 4,892,741 to 4,893,904 _22340 AO353_22345: AO353_22345 - ATPase, at 4,893,873 to 4,896,467 _22345 AO353_22350: AO353_22350 - LuxR family transcriptional regulator, at 4,896,528 to 4,897,193 _22350
Group Condition AO353_22330 AO353_22335 AO353_22340 AO353_22345 AO353_22350
carbon source Ethanol (C) -0.1 +0.1 -1.0 -0.6 -3.3
carbon source Ethanol (C) -0.3 -0.2 -0.5 -0.8 -2.0
carbon source Trisodium citrate (C) -0.4 -0.1 -1.3 -1.8 +0.1
carbon source L-Citrulline (C) -0.3 -0.2 -0.7 -0.7 -0.9
pH Minimal media pH9 -0.5 -0.2 -0.7 -0.4 -0.8
nitrogen source L-tyrosine (N) +0.1 -0.3 -0.3 -1.1 -0.9
carbon source Putrescine (C) +0.2 -0.1 -0.5 -0.8 -1.2
carbon source L-Histidine (C) -0.5 -0.1 -0.5 -0.5 -0.6
carbon source L-Valine (C) -0.8 +0.1 -0.4 -0.6 -0.4
carbon source Trisodium citrate (C) -0.0 +0.1 -1.2 -1.4 +0.4
carbon source D-Glucosamine Hydrochloride (C) -0.1 -0.1 -1.0 -0.7 -0.0
carbon source L-Isoleucine (C) -0.4 +0.0 -0.4 -1.3 +0.3
carbon source L-Leucine (C) -0.8 -0.3 +0.3 +0.4 -1.4
carbon source L-Asparagine (C) -0.9 +0.1 -0.3 -0.3 -0.4
denitrifying Nitrate reduction, replicate B -0.5 -0.1 +0.3 -0.4 -0.9
carbon source L-Histidine (C) +0.3 -0.1 -1.0 -0.8 +0.1
motility outer cut, LB soft agar motility assay -1.5 +0.1 -0.1 +0.2 -0.2
carbon source L-Citrulline -0.0 +0.2 -0.1 -0.1 -1.3
carbon source D-Glucose -0.9 -0.2 +0.4 +0.1 -0.7
carbon source L-Citrulline +0.5 -0.1 -0.3 -0.5 -0.7
pH Minimal media pH9 +0.2 -0.4 -0.4 -0.7 +0.2
carbon source L-Tryptophan (C) +0.3 +0.2 -0.1 +0.3 -1.2
anaerobic Anaerobic, acetate donor; nitrate and iron -1.2 -0.2 +0.7 +0.4 -0.3
carbon source Cytidine (C) +0.1 +0.1 +0.4 +0.4 -1.1
carbon source L-Ornithine -0.3 +0.2 +0.9 +0.7 -1.2
carbon source L-Ornithine +0.1 +0.4 +0.7 +1.0 -1.1
carbon source L-Ornithine +0.1 +0.2 +0.7 +0.8 -0.7
carbon source acetate (C) +0.1 -0.2 +0.5 +1.0 +0.1
carbon source acetate (C) +0.5 -0.4 +0.9 +1.1 -0.4
carbon source L-Ornithine -0.0 +0.6 +0.9 +1.0 -0.4
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