Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_22165 and AO353_22170 are separated by 241 nucleotidesAO353_22170 and AO353_22175 are separated by 375 nucleotidesAO353_22175 and AO353_22180 are separated by 416 nucleotidesAO353_22180 and AO353_22185 are separated by 28 nucleotides AO353_22165: AO353_22165 - amino acid amidase, at 4,854,399 to 4,854,749 _22165 AO353_22170: AO353_22170 - 7-cyano-7-deazaguanine synthase, at 4,854,991 to 4,855,689 _22170 AO353_22175: AO353_22175 - oxidoreductase, at 4,856,065 to 4,857,447 _22175 AO353_22180: AO353_22180 - 2-oxobutyrate oxidase, at 4,857,864 to 4,858,901 _22180 AO353_22185: AO353_22185 - metal ABC transporter substrate-binding protein, at 4,858,930 to 4,859,745 _22185
Group Condition AO353_22165 AO353_22170 AO353_22175 AO353_22180 AO353_22185
anaerobic Anaerobic, acetate donor; nitrate and iron N.D. -0.5 +0.1 -1.1 +0.1
motility outer cut, LB soft agar motility assay N.D. -1.0 -0.0 -0.0 -0.3
stress Furfuryl Alcohol 0.125 vol% N.D. -0.1 -0.1 -0.7 -0.3
stress Cisplatin 0.006 mg/ml N.D. -0.5 -0.1 -0.4 -0.1
nitrogen source Adenosine (N) N.D. -0.0 -0.3 -0.5 -0.1
stress Cisplatin 0.006 mg/ml N.D. +0.1 -0.1 -0.9 +0.1
carbon source L-Phenylalanine (C) N.D. -0.9 +0.0 +0.0 +0.1
stress Doxycycline hyclate 0.0006 mg/ml N.D. +0.4 -0.2 -1.0 +0.2
carbon source L-Citrulline N.D. -0.0 +0.3 -0.5 -0.2
nitrogen source nitrite (N) N.D. +0.3 +0.1 -0.8 -0.0
carbon source Uridine (C) N.D. +0.3 -0.0 -0.6 -0.0
carbon source propionate (C) N.D. -0.5 +0.1 +0.3 -0.1
stress Thallium(I) acetate 0.016 mg/ml N.D. +0.1 -0.2 -0.3 +0.3
lb LB N.D. +0.2 -0.1 -0.4 +0.2
carbon source D-Glucose N.D. +0.5 -0.1 -0.4 +0.0
stress Vancomycin 1 mg/ml N.D. +0.3 +0.2 -0.3 -0.2
carbon source L-Ornithine N.D. -0.4 +0.2 -0.1 +0.3
carbon source acetate (C) N.D. -0.3 +0.4 +0.3 -0.1
carbon source L-Citrulline N.D. -0.5 +0.2 +0.2 +0.3
carbon source L-Citrulline N.D. -0.4 +0.3 +0.1 +0.2
carbon source Carnitine Hydrochloride (C) N.D. +0.4 +0.1 -0.3 +0.2
motility outer cut, LB soft agar motility assay N.D. +0.7 +0.1 +0.2 -0.3
stress Benzalkonium Chloride 0.012 mg/ml N.D. +0.2 +0.2 +0.4 -0.1
carbon source acetate (C) N.D. +0.3 +0.2 +0.4 -0.1
carbon source L-Leucine (C) N.D. +0.7 -0.1 +0.1 +0.1
anaerobic N1B4wt with N2E3m denitrifying replicate C N.D. +0.5 +0.1 +0.1 +0.3
survival 4C survival; 672 hrs N.D. +0.2 +0.3 +0.4 +0.2
stress Paraquat dichloride 0.032 mg/mL N.D. +0.2 +0.3 +0.7 +0.1
stress sodium fluoride 6.25 mM N.D. +0.3 +0.2 +0.7 +0.2
carbon source L-Ornithine N.D. -0.1 +0.3 +0.8 +0.5
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