Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_22055 and AO353_22060 overlap by 7 nucleotidesAO353_22060 and AO353_22065 are separated by 737 nucleotidesAO353_22065 and AO353_22070 are separated by 75 nucleotidesAO353_22070 and AO353_22075 are separated by 86 nucleotides AO353_22055: AO353_22055 - protease, at 4,829,752 to 4,830,642 _22055 AO353_22060: AO353_22060 - lipid carrier protein, at 4,830,636 to 4,831,103 _22060 AO353_22065: AO353_22065 - zinc-binding protein, at 4,831,841 to 4,832,245 _22065 AO353_22070: AO353_22070 - DnrE protein, at 4,832,321 to 4,832,998 _22070 AO353_22075: AO353_22075 - hypothetical protein, at 4,833,085 to 4,833,732 _22075
Group Condition AO353_22055 AO353_22060 AO353_22065 AO353_22070 AO353_22075
anaerobic N1B4wt with N2E3m denitrifying replicate C -0.6 N.D. N.D. -0.1 -2.9
denitrifying Nitrate reduction, replicate B -0.1 N.D. N.D. -0.6 -2.6
denitrifying Nitrate reduction, replicate C -0.5 N.D. N.D. -0.5 -1.7
stress Cholin acetate 38 mM -0.7 N.D. N.D. -0.2 -0.5
carbon source L-Isoleucine (C) -0.8 N.D. N.D. -0.6 -0.0
stress Cobalt chloride 0.32 mM -0.1 N.D. N.D. -0.3 -0.9
stress Nickel (II) chloride 0.625 mM -0.9 N.D. N.D. +0.3 -0.5
nitrogen source Gly-DL-Asp (N) -0.4 N.D. N.D. -0.1 -0.6
carbon source L-Valine (C) -0.8 N.D. N.D. -0.0 -0.3
stress acetate 68 mM -0.0 N.D. N.D. -0.1 -0.9
nitrogen source L-Serine (N) -0.1 N.D. N.D. -0.4 -0.5
carbon source L-Citrulline -1.1 N.D. N.D. -0.1 +0.3
stress Lomefloxacin 0.001 mM +0.2 N.D. N.D. -0.4 -0.7
carbon source L-Serine (C) -0.6 N.D. N.D. -0.3 +0.0
carbon source L-Ornithine -0.8 N.D. N.D. +0.3 -0.2
survival 4C survival; 360 hrs -0.2 N.D. N.D. +0.2 -0.8
stress copper (II) chloride 2.5 mM -0.2 N.D. N.D. -0.7 +0.3
motility outer cut, LB soft agar motility assay -0.3 N.D. N.D. +0.2 -0.5
anaerobic Anaerobic, acetate donor; nitrate and iron +0.3 N.D. N.D. -0.1 -0.7
nitrogen source Parabanic Acid (N) +0.3 N.D. N.D. +0.2 -0.7
motility outer cut, LB soft agar motility assay -0.7 N.D. N.D. +0.2 +0.3
carbon source D-Glucose -0.2 N.D. N.D. +0.4 -0.3
stress Thallium(I) acetate 0.016 mg/ml +0.1 N.D. N.D. +0.3 -0.5
stress Doxycycline hyclate 0.0006 mg/ml +0.6 N.D. N.D. +0.3 -0.8
carbon source Ethanol (C) -0.4 N.D. N.D. +0.4 +0.4
carbon source L-Glutamine (C) -0.3 N.D. N.D. +0.5 +0.3
carbon source D-Trehalose (C) -0.3 N.D. N.D. +0.3 +0.5
carbon source Ethanol (C) +0.1 N.D. N.D. +0.5 +0.4
carbon source D-Glucose (C) +0.3 N.D. N.D. +0.3 +0.5
stress Cisplatin 0.006 mg/ml +0.7 N.D. N.D. +0.8 +0.3
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