Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_22020 and AO353_22025 are separated by 75 nucleotidesAO353_22025 and AO353_22030 are separated by 154 nucleotidesAO353_22030 and AO353_22035 are separated by 88 nucleotidesAO353_22035 and AO353_22040 are separated by 100 nucleotides AO353_22020: AO353_22020 - hypothetical protein, at 4,823,037 to 4,823,474 _22020 AO353_22025: AO353_22025 - iron-sulfur cluster repair di-iron protein, at 4,823,550 to 4,824,224 _22025 AO353_22030: AO353_22030 - transcriptional regulator, at 4,824,379 to 4,825,908 _22030 AO353_22035: AO353_22035 - pyridoxine 5'-phosphate oxidase, at 4,825,997 to 4,826,644 _22035 AO353_22040: AO353_22040 - molybdenum cofactor biosynthesis protein B, at 4,826,745 to 4,827,299 _22040
Group Condition AO353_22020 AO353_22025 AO353_22030 AO353_22035 AO353_22040
carbon source L-Citrulline +0.2 -3.3 -0.2 +0.1 -0.6
stress Cisplatin 0.006 mg/ml +0.4 -2.1 +0.3 -1.5 +0.4
pH Minimal media pH9 +0.3 -1.1 -0.5 -0.8 -0.2
nitrogen source L-Glutamic (N) -0.4 -1.3 -0.2 -0.7 +0.2
carbon source L-Aspartic Acid (C) -0.2 -2.1 -0.3 +0.0 +0.3
carbon source L-Leucine (C) -0.1 -0.5 +0.0 -1.2 -0.3
carbon source L-Ornithine +0.0 -0.8 -0.1 -1.1 +0.0
denitrifying Nitrate reduction, replicate B -0.5 -0.7 -0.6 -0.4 +0.2
carbon source L-Valine (C) +0.1 -1.2 -0.3 -0.5 -0.0
carbon source acetate (C) -0.4 -1.1 -0.2 +0.2 -0.2
carbon source L-Ornithine -0.1 -1.0 -0.0 +0.2 -0.7
stress Thallium(I) acetate 0.008 mg/ml -0.0 -1.4 +0.2 -0.0 -0.1
nitrogen source Inosine (N) +0.2 -0.9 -0.3 -0.4 +0.2
motility outer cut, LB soft agar motility assay +0.0 -0.0 -0.1 -1.6 +0.5
carbon source L-Citrulline -0.7 -0.6 -0.1 +0.4 -0.3
nitrogen source Parabanic Acid (N) +0.6 -1.1 -0.2 -0.3 +0.1
anaerobic N1B4wt with N2E3m denitrifying replicate C +0.2 -0.3 -0.1 +0.4 -1.1
stress Tetracycline 0.0016 mg/ml +0.0 -1.2 +0.2 +0.4 -0.0
carbon source L-Citrulline -0.4 -0.7 +0.3 +0.9 -0.5
stress Doxycycline hyclate 0.0006 mg/ml -0.1 +0.8 +0.3 -1.0 -0.3
denitrifying Nitrate reduction, replicate C -0.2 +0.8 -0.3 -0.8 +0.4
anaerobic Anaerobic, acetate donor; nitrate and iron +0.9 -1.2 -0.2 +0.3 +0.2
stress nitrate 200 mM -0.2 +1.1 +0.1 -0.2 -0.4
motility outer cut, LB soft agar motility assay +0.6 -0.7 -0.3 +0.4 +0.4
stress Sisomicin 0.008 mg/ml +0.4 +0.4 +0.2 -0.9 +0.3
motility outer cut, LB soft agar motility assay -0.1 +0.7 +0.2 -0.7 +0.5
stress Cisplatin 0.006 mg/ml +0.3 -0.7 +0.1 +0.2 +0.8
stress Gentamicin 0.006 mg/ml +0.1 +0.6 +0.4 -0.7 +0.2
stress syringaldehyde 5 mM -0.3 +1.1 +0.1 +0.0 +0.6
stress methylglyoxal 0.009 vol% -0.1 +1.4 -0.0 +0.4 +0.8
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