Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_21845 and AO353_21850 are separated by 969 nucleotidesAO353_21850 and AO353_21855 are separated by 32 nucleotidesAO353_21855 and AO353_21860 overlap by 4 nucleotidesAO353_21860 and AO353_21865 overlap by 4 nucleotides AO353_21845: AO353_21845 - tRNA-Gly, at 4,790,992 to 4,791,067 _21845 AO353_21850: AO353_21850 - diguanylate cyclase, at 4,792,037 to 4,793,551 _21850 AO353_21855: AO353_21855 - ABC transporter ATP-binding protein, at 4,793,584 to 4,794,555 _21855 AO353_21860: AO353_21860 - methionine ABC transporter ATP-binding protein, at 4,794,552 to 4,795,538 _21860 AO353_21865: AO353_21865 - nickel ABC transporter permease, at 4,795,535 to 4,796,392 _21865
Group Condition AO353_21845 AO353_21850 AO353_21855 AO353_21860 AO353_21865
carbon source L-Citrulline N.D. -0.0 -0.8 +0.3 -0.4
carbon source propionate (C) N.D. -0.1 -0.3 -0.3 -0.2
carbon source L-Citrulline N.D. +0.1 -0.4 +0.2 -0.7
carbon source D-Glucose N.D. +0.1 -0.3 -0.3 -0.1
stress Nickel (II) chloride 0.625 mM N.D. -0.0 -0.4 -0.1 -0.2
carbon source L-Ornithine N.D. +0.2 -0.4 -0.2 -0.3
pH Minimal media pH9 N.D. -0.1 -0.4 +0.2 -0.2
lb LB N.D. -0.0 +0.2 -0.1 -0.4
motility outer cut, LB soft agar motility assay N.D. -0.1 +0.2 -0.3 -0.0
stress Lomefloxacin 0.001 mM N.D. -0.2 -0.4 +0.1 +0.3
carbon source D-Glucose N.D. +0.3 -0.3 -0.1 -0.2
denitrifying Nitrate reduction, replicate B N.D. +0.2 +0.1 -0.3 -0.2
stress Cisplatin 0.006 mg/ml N.D. -0.3 -0.1 +0.3 +0.0
carbon source L-Tryptophan (C) N.D. +0.0 -0.4 +0.2 -0.1
denitrifying Nitrate reduction, replicate C N.D. +0.2 +0.1 -0.6 +0.0
nitrogen source L-tyrosine (N) N.D. +0.1 +0.1 -0.4 +0.2
carbon source L-Isoleucine (C) N.D. +0.1 -0.3 -0.1 +0.3
stress Sisomicin 0.008 mg/ml N.D. +0.1 -0.1 +0.2 -0.2
carbon source L-Aspartic Acid (C) N.D. -0.1 -0.3 +0.1 +0.3
stress acetate 68 mM N.D. -0.2 +0.0 -0.1 +0.4
carbon source acetate (C) N.D. -0.0 +0.3 -0.4 +0.3
stress Cisplatin 0.006 mg/ml N.D. -0.3 +0.4 +0.1 -0.0
nitrogen source L-Serine (N) N.D. -0.2 +0.2 +0.3 -0.1
stress Thallium(I) acetate 0.016 mg/ml N.D. -0.1 +0.3 +0.2 -0.1
nitrogen source L-Arginine (N) N.D. -0.2 +0.3 +0.2 +0.1
stress methylglyoxal 0.009 vol% N.D. +0.2 -0.2 +0.3 +0.1
stress Thallium(I) acetate 0.008 mg/ml N.D. +0.1 +0.5 +0.1 -0.1
anaerobic Anaerobic, acetate donor; nitrate and iron N.D. +0.2 +0.6 -0.1 -0.0
stress perchlorate 75 mM N.D. +0.0 +0.3 +0.2 +0.1
motility outer cut, LB soft agar motility assay N.D. +0.1 +0.3 +0.0 +0.3
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